Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3993 |
Symbol | |
ID | 6780857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 4530725 |
End bp | 4532068 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642769988 |
Product | MATE efflux family protein |
Protein accession | YP_002140781 |
Protein GI | 197120354 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGCGTC TCTTTATCAA AAGAAGAAGG AAACCGGTCT CGATCCGCCG CAACGTCGCG GCGCTTTCGA TGCCGGTGCT CCTGTCGTCC CTGTTCCAGC GCCTGGTTTC CATCGTCGAC ATCTTCATGG TCGGCGGGTT GGGAGCGGCT GCCATCGCCG CCACCGGCCT CGGCCAGTTG CTGATCTTCG TGACCATGAC GGTGTTCTGG GGGCTTTCCA CCGGCGCCAA CGTGGTTATA GCGCATCTTT GGGGCGCGGG GCGCCAACTT GAGGCACGCC GGGCGGGCTT CGCCTCGCTT TTGCTTTGCG CCCTTCTCGC CGTGGCGGCG ACCCTTTTGG GGATTGGTTT CGGCAGCGAG GTGGCAACCT TCATGGGGGC GAGCAGCGAC GTCCTGGCCT ACGCCTCGCC TTATATCCGA CTGGTCTTTC TCTACTTCGC CTTTACCGCC GGACTCAACA TCCTCTCCGC CATCAGCCAG GGGACCGGCA ACACCAGGAC GCCGATGGAG GCCATCCTCC TGGTCAATAT CCTGCACGTG GTCATCGCCT ACCCGCTCAT CTACGGCAAG TTCGGCTTCC CCCGCTACGG TGTGATTGGT GCCGCTTACG CGATCAACAT CTCGGAGGCT GCAGGATTCA TCTACCTCCT GATCCAGTCG CTCAGGAAGG GGTATCTGAA GATTGGCCCT CCCGACATGG TGCTCCTGAA TAAAGTATGG AAGATCGGCT ACCCGGTCGC GCTGGAGCGG ATCGCCCAGC AGTCGGGACA GCTTTTCTAC TCCAAGTTCA TCATCGGCTT CGGCACCGCC GCCTACGCGG CGCACCAGAT CGGGCTCTCC ATCGAATCTC TTTCCTTCAT GCCCGGGGCC GGCATGGGGA TCGCCGCCGC CACCTTGATG GGACAGTCGC TGGGCGCCAA GAAACTCAGG CGCGCCCACA TGAGCCACAC CGAAGCGCTG CGGCTCGCCA TCATCGTCAT GGCCTGCATG GCGCTCCTCT TTTTCTTCAT TCCGCACCAC CTGATCGCCC TCTTCACCAG CGATCCCGAC GTCATCGAAA AAGGAAGCGT CTTCCTGAAG CTGGTCGCCT TCGCCCAGGT GCCGCTCGCC ATCTCCTTCG TCTATGCCGG GAGCCTGCGC GGTACCGGCG ACACGCATTA CGTCTTCCTG GTAACACTCG TCGCCATGTG GGGGATCAGG GTGCTTCTCT CCTACGTCGC CGCAGTCCCG CTGCACCTCT CGCTCTACGC CGTCTGGGGG GTGTTCCTGG TGGACTGGTT CTTCCGGGCC GGCGCTTTCT ATTGGCGCTA CCAGCGCCGC GACCTGCACA GCGTCATCAT CTAG
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Protein sequence | MKRLFIKRRR KPVSIRRNVA ALSMPVLLSS LFQRLVSIVD IFMVGGLGAA AIAATGLGQL LIFVTMTVFW GLSTGANVVI AHLWGAGRQL EARRAGFASL LLCALLAVAA TLLGIGFGSE VATFMGASSD VLAYASPYIR LVFLYFAFTA GLNILSAISQ GTGNTRTPME AILLVNILHV VIAYPLIYGK FGFPRYGVIG AAYAINISEA AGFIYLLIQS LRKGYLKIGP PDMVLLNKVW KIGYPVALER IAQQSGQLFY SKFIIGFGTA AYAAHQIGLS IESLSFMPGA GMGIAAATLM GQSLGAKKLR RAHMSHTEAL RLAIIVMACM ALLFFFIPHH LIALFTSDPD VIEKGSVFLK LVAFAQVPLA ISFVYAGSLR GTGDTHYVFL VTLVAMWGIR VLLSYVAAVP LHLSLYAVWG VFLVDWFFRA GAFYWRYQRR DLHSVII
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