Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3971 |
Symbol | |
ID | 6780835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4508385 |
End bp | 4510061 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642769966 |
Product | beta-lactamase domain protein |
Protein accession | YP_002140759 |
Protein GI | 197120332 |
COG category | [R] General function prediction only |
COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.313503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAGAAA CCAGCACAGA GAGTACCGGG CTTAAGTTCG TAGCACTGGG AGGACTAGGA GAAATCGGCC TTAACATGGC GGCCTTCGAG TACGGCGACG ACATCGTCAT CGTCGACTGC GGGCTCATGT TCCCCGAGCC TTACATGCTG GGAATTGACG TGGTGATCCC CGACATTGGC TACCTGATCG AGAGGGCGGA CCGCATCCGC GCCATCCTGC TCACCCACGG CCACGAGGAC CACATCGGCG CGCTTCCCTA CGTGCTTAGG GATATCAATC CCCCCATCTA CGGGACGGCG CTGACACTGG GCTTCGTGAA GGAAAAGCTC AAGGAATTCG AGCTGGATCA AAAGGTCGAC CTGAGGGTGG TCAAGCCGCG GGACACGGTG CAGCTCGGCT CTTTCGAGGT CGAGTTCATC CGGGTCGCAC ATTCCATCGT CGACGGCTGC GCCCTGGCCC TAAGCTGCCC GGAAGGGGTG GTGATACACA CCGGCGACTT CAAGCTGGAC CAGACACCGG TCGACGGCGA ACTGACCGAT CTCGCGACCT TCTCCCGCTA CGGCGAGAAG GGGGTGCTCG CGCTCTTCGC GGACTCGACC AACATCGAGC GCGAGGGGTA CACGCTTTCC GAACGGCTGG TGGGGGATGC TTTCGAGGAG ATCTTCCCGG CCTGCGCCGG CAGGGTCATC GTCGCCGCCT TCTCCAGCAA CATCCACCGT GTGCAGCAGG TGGTGCGCGC GGCGGAGAAA AGCGGCAGGA AGGTGCTTTT GAACGGCCGC TCCATGATCG GCAACGTGCA GATCGCGCGC GAACTGGGCT ACCTGAAGAT CCCGGACGAC ATACTGATCG ACCTGAAGGA GCTCCCCAGG CTCCCGAAGG AACAGGTCTG CATGATCACC ACCGGGAGCC AGGGGGAACC CAGAAGTTCG CTGATCCGGA TTGCCATGGA CGACCACAAG CAGATCAAGC TGGAGCGCGG GGATACGGTC ATCCTCTCCT CCCGCTTTAT CCCGGGCAAC GAAAAGACCA TTTCGGACCT GATGAACCAC CTGTACCGGC GCGGCGCCGA GGTGATTCAC GAGAAGGTTT CCGAGGTCCA CGTCTCCGGC CACGCGAGCC AGGAGGAGTT GAAGCTCCTG CACAACCTGG TGAAGCCGCG CTTCTTCGTC CCGGTGCACG GCGAGTACCG GCACCTGGTT AAGCACTCCC AACTGGCCCA GAAGGTCGGC ACCCCCGAGG AGCGCTGCAT CCTCGCGGTC AACGGCGACG TCATCCTCTT TGCCGGGGAC GAGGCGTGCA TCGTGGACCA GGTCAGCACC GGCCGCGTCT TCGTGGACGG CAAAGGGGTA GGGGACGTCG GCAACGTAGT GCTTAAGGAT AGGAAGCATC TCTCCGAAGA TGGAATGGTG GTGGTCATCA TCGGCATCAA CCAGACCACC GGCGAGATCA TCTACGGCCC CGACATCGTT TCACGCGGCT TCGTCTTCGA GGACGATAGC CAGGAGTATC TGGAAGAGGC GAAGAAGGTC GTGCTCGACA CGCTGGCCTT GGTCACCCCC GAGGTGATGA CAGACTGGAA CGAGGTGAAG CTGGAAGTGC GCCGCGTGCT GCGCCGGCTC TTCAACAAGA CCCTGGAAAG GCGACCGGTG ATACTGCCGC TCGTGTTGGA GATGTGA
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Protein sequence | MEETSTESTG LKFVALGGLG EIGLNMAAFE YGDDIVIVDC GLMFPEPYML GIDVVIPDIG YLIERADRIR AILLTHGHED HIGALPYVLR DINPPIYGTA LTLGFVKEKL KEFELDQKVD LRVVKPRDTV QLGSFEVEFI RVAHSIVDGC ALALSCPEGV VIHTGDFKLD QTPVDGELTD LATFSRYGEK GVLALFADST NIEREGYTLS ERLVGDAFEE IFPACAGRVI VAAFSSNIHR VQQVVRAAEK SGRKVLLNGR SMIGNVQIAR ELGYLKIPDD ILIDLKELPR LPKEQVCMIT TGSQGEPRSS LIRIAMDDHK QIKLERGDTV ILSSRFIPGN EKTISDLMNH LYRRGAEVIH EKVSEVHVSG HASQEELKLL HNLVKPRFFV PVHGEYRHLV KHSQLAQKVG TPEERCILAV NGDVILFAGD EACIVDQVST GRVFVDGKGV GDVGNVVLKD RKHLSEDGMV VVIIGINQTT GEIIYGPDIV SRGFVFEDDS QEYLEEAKKV VLDTLALVTP EVMTDWNEVK LEVRRVLRRL FNKTLERRPV ILPLVLEM
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