| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3948 |
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| Symbol | |
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| ID | 6780812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4485231 |
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| End bp | 4486607 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642769943 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002140736 |
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| Protein GI | 197120309 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACG GCCACGAGCT GCTGCACCAA CCGATCCCGG GGCTGATCAG GAAACTGGCC
ATTCCCACCA GCGTCGGCTA TTTCTTCAAC ACCATGTTCA ACGTGGTCGA CACCTTCTAC
GGCGGGAGGG TCTCCACCGA GGCGCTCGCC GCACTTTCCT TATCTTTCCC CATCTTCTTC
CTCATCATCG CCATCGGCGC CGGGATCTCC ACCGGAGCCA CCGCGCTCAT AGGTCACGAA
CTCGGCGCGG GCAACGCCGA AGAGGCGAGG CACCTGGCGG GGCAGACCAT CTCCTTTGGC
ATCGTGCACG GCTTCCTGGT CGCAGCGGTC GGCTTCTCGG CCGCTCCGCT CCTCTTCCAG
CTCCTGGGCG CCAAAGGCCC AGTGCTTCAG TTCGCGCTGC AGTACATGGA CACCATCTTC
ACCGGGAGCA TTTTCTTCCT GATCAACTAC GTCTTGAACT CCATCTTGAA CGCGACCGGC
GACAGCCGCA GCTTCCGCAA CTTCCTCGTC GTCGGCTTCT TCCTAAACAT GATTTTCGAC
CCCTGGTTTC TCTATGGAGG ACTCGGGGTG CCGGCGCTGG GGCTTTCCGG CATAGCCTGG
GCGACCGTGC TGGTTCAGGG GATGGGCAAC ATTTATCTCG CCATGAGAGT CAGGCAGTCG
GGTATGCTGG AGGGGTTCCG CTGGAGGGAG CTGGTCCCCC GCCGGCACCC CTATTCGCAA
CTGGCCCGGC AGGGGTTTCC TTCCAGCCTC AACATGATGA CCGTAGCTAG CGGCATCTTC
CTGATCACCT GGTTCGTCGG GCGCTTCGGG AGCGAGGCGG TGGCGGCCTA CGGCATTGGG
GCGCGGATCG AGCAGATCGC TCTCCTTCCG GTGATGGGAA TGAACGTGGC GACGCTCGCC
CTGGTGGCCC AGAACAGCGG AGCGCGGCAA CTGGAGCGGG TGGTGCAGAC CATCAAGACG
GCGCTGCGGG TCGGGGTGGC GTTCATGGGG GCGGGAACGG TTGTCGTCTA TCTGGCGGCC
CGTCCGCTGA TGGGGCTTTT CAGCAACGAC CCCAAGGTGG TGGAGATAGG GGTCGGCTAT
CTCAGGATCG AGGCTTTCGT CTTCGTTGCT TACGTCATCC TCTACACCTG CGTCGCCGTA
CTGCAGGGGT TGAAGAGGCC TGGCTTTGCC CTGATGGTCG GGTTGATGAG GCAGATCGTT
TTCCCCCTTC CGGTGTTCTA CCTCCTGGCG GTGTTCTTGG GGTTCGGGCT CGCCGGGATC
TGGTGGGGAA TACTGCTGGT GACCTGGGGG GCTGCCTGCG TAACGGTTTT GTACGTGCTG
CGGCTGGCGG CCGGCATGAG CCCGGCCGAA CCACGCCTGG ATAGGGCTGC CGACTGA
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| Protein sequence | MNHGHELLHQ PIPGLIRKLA IPTSVGYFFN TMFNVVDTFY GGRVSTEALA ALSLSFPIFF
LIIAIGAGIS TGATALIGHE LGAGNAEEAR HLAGQTISFG IVHGFLVAAV GFSAAPLLFQ
LLGAKGPVLQ FALQYMDTIF TGSIFFLINY VLNSILNATG DSRSFRNFLV VGFFLNMIFD
PWFLYGGLGV PALGLSGIAW ATVLVQGMGN IYLAMRVRQS GMLEGFRWRE LVPRRHPYSQ
LARQGFPSSL NMMTVASGIF LITWFVGRFG SEAVAAYGIG ARIEQIALLP VMGMNVATLA
LVAQNSGARQ LERVVQTIKT ALRVGVAFMG AGTVVVYLAA RPLMGLFSND PKVVEIGVGY
LRIEAFVFVA YVILYTCVAV LQGLKRPGFA LMVGLMRQIV FPLPVFYLLA VFLGFGLAGI
WWGILLVTWG AACVTVLYVL RLAAGMSPAE PRLDRAAD
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