Gene Gbem_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3938 
Symbol 
ID6780802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4475314 
End bp4475811 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content57% 
IMG OID642769933 
ProductRubrerythrin 
Protein accessionYP_002140726 
Protein GI197120299 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.691513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAGG AGTACACACT GCAGGAGGCG CTGAAGCTCG CTATCAAAAC AGAAAAGGGG 
AGCATGGATT TCTACCGGAA GGCGGCTTCC ATTTCAAAGG ACGAGGGGTC CAAAAAGGTG
TTCACCCTGC TGGCCGGCGA AGAGGCAGGA CATCTGAAGG CATTCTTCGA CCATTACAAG
GGGGGGGACC TAGGCGACCT GGACAGCTTT ATGGCCTCGC CCCCGGACAA GCAATCCGCC
ACGCACCAGG CGCTGGAGCA ATCCATCGCC GAGGGAACCG GAGAGCAGAA GGCGCTGGAG
ATTGCGCTCA AGGAGGAGAA ATCCTGCGTC GACTTCTACA CCATCCTGGT CAAAGACATC
GTCGACCCCT TGGTGCGCCG GGTCTTCGAG ACGGTGATCC GCGAGACCCA GGGACACCAC
GACATGATCG AGGACGAGTA CATGCGGGTC ATGACCATGG TGCACAGCTC TGATCAGAAC
ATTTACGTGA GGGAGTAA
 
Protein sequence
MFKEYTLQEA LKLAIKTEKG SMDFYRKAAS ISKDEGSKKV FTLLAGEEAG HLKAFFDHYK 
GGDLGDLDSF MASPPDKQSA THQALEQSIA EGTGEQKALE IALKEEKSCV DFYTILVKDI
VDPLVRRVFE TVIRETQGHH DMIEDEYMRV MTMVHSSDQN IYVRE