Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3928 |
Symbol | |
ID | 6780792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4466838 |
End bp | 4467875 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642769923 |
Product | General secretory system II protein E domain protein |
Protein accession | YP_002140716 |
Protein GI | 197120289 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00083498 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGCAC GGCTTGGCGA GATGTTGCTG AAGGTTGGAA CCCTGACCGA GGACCAACTG GAGCAGGTGC TTAACGCGCA GTCCATCTAT GGCGGCAGGC TCGGGACTAA TCTCGTGGAG ATGGGGTTCG TCGAAGAGGA AGAATTGGCG CACGTATTGA GCGAGCAGCT TGGCGTACCC TGCGCCCACC CCTCCGAACT CGGCTCCATT CCGGAATCCC TATTGAAGAT GTTCCCGCTG GAGCTGGTGC AGCGCTACCG CGTACTCCCC CTCGCATTGG ACGGCAAGCG GCTCACCGTG GCCATGACGA ACCCATCGGA TTTCAAGGCG CTCGAAGACA TCGCTTTTGT TACCGGGATG GTCATCATCC CAAGGGTCTG CTCCGAACTA CGGCTAAGCA TCGCACTGGA GCGTATCTTC GGGGTGAAGC GCCCCATGCG CTACATCCCT GTGGAGGGAG GTGCTAGGAG CTGCTTCGCC GCCACCCTCG CTCAGAGGGG GAGCGCGGAC CCCGCCTGGG ATGGCGGCGC TTCTCGCCAT TCTTCTGAGC GGGTCAGCCT GGAGGATATG TCCGAACGGC TGGCAAAAGC CCTCGGAGAG TCCGAGGTCG TTCAGGCGAT ACTGTCCTAT TTGGCAGGTG AATTTGACCG GGGTGCCTTC CTGAGGCTGA AAGGGGGGTG CGCGCACGGG GTCCAGGCAG TTGATGCCGG CGCACCCGTG AAAGGCTTCC CGTTTTTTGC CGCTGCGGTG GCGGAAATGA GGCAGGTGAA ACGGGTGGTG GAGGAAAGGC GACTCTTTTT AGGGGAGCTA GGGCAGGACC AGGGCGATGG GCTGTTGCTA GGTGCGATGG GGGGTACGGC GCCCGGGGCG GCGCTGCTGG TGCCTGTGGC GCTTGGCGGG CATGTGGTGG GGGTTATCTG CGCCAGCGAT CAGAGGGGGA GGCTCGGCGG TGGGGTCTTC GAGCTGCAGC GGGTGGCGGT GATGGCAGAG TTGAGCTTCG AGATGCTGTC ACTCAGGAAA AGGATCATGA TTGGGTGA
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Protein sequence | MSARLGEMLL KVGTLTEDQL EQVLNAQSIY GGRLGTNLVE MGFVEEEELA HVLSEQLGVP CAHPSELGSI PESLLKMFPL ELVQRYRVLP LALDGKRLTV AMTNPSDFKA LEDIAFVTGM VIIPRVCSEL RLSIALERIF GVKRPMRYIP VEGGARSCFA ATLAQRGSAD PAWDGGASRH SSERVSLEDM SERLAKALGE SEVVQAILSY LAGEFDRGAF LRLKGGCAHG VQAVDAGAPV KGFPFFAAAV AEMRQVKRVV EERRLFLGEL GQDQGDGLLL GAMGGTAPGA ALLVPVALGG HVVGVICASD QRGRLGGGVF ELQRVAVMAE LSFEMLSLRK RIMIG
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