Gene Gbem_3928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3928 
Symbol 
ID6780792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4466838 
End bp4467875 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content62% 
IMG OID642769923 
ProductGeneral secretory system II protein E domain protein 
Protein accessionYP_002140716 
Protein GI197120289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00083498 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGCAC GGCTTGGCGA GATGTTGCTG AAGGTTGGAA CCCTGACCGA GGACCAACTG 
GAGCAGGTGC TTAACGCGCA GTCCATCTAT GGCGGCAGGC TCGGGACTAA TCTCGTGGAG
ATGGGGTTCG TCGAAGAGGA AGAATTGGCG CACGTATTGA GCGAGCAGCT TGGCGTACCC
TGCGCCCACC CCTCCGAACT CGGCTCCATT CCGGAATCCC TATTGAAGAT GTTCCCGCTG
GAGCTGGTGC AGCGCTACCG CGTACTCCCC CTCGCATTGG ACGGCAAGCG GCTCACCGTG
GCCATGACGA ACCCATCGGA TTTCAAGGCG CTCGAAGACA TCGCTTTTGT TACCGGGATG
GTCATCATCC CAAGGGTCTG CTCCGAACTA CGGCTAAGCA TCGCACTGGA GCGTATCTTC
GGGGTGAAGC GCCCCATGCG CTACATCCCT GTGGAGGGAG GTGCTAGGAG CTGCTTCGCC
GCCACCCTCG CTCAGAGGGG GAGCGCGGAC CCCGCCTGGG ATGGCGGCGC TTCTCGCCAT
TCTTCTGAGC GGGTCAGCCT GGAGGATATG TCCGAACGGC TGGCAAAAGC CCTCGGAGAG
TCCGAGGTCG TTCAGGCGAT ACTGTCCTAT TTGGCAGGTG AATTTGACCG GGGTGCCTTC
CTGAGGCTGA AAGGGGGGTG CGCGCACGGG GTCCAGGCAG TTGATGCCGG CGCACCCGTG
AAAGGCTTCC CGTTTTTTGC CGCTGCGGTG GCGGAAATGA GGCAGGTGAA ACGGGTGGTG
GAGGAAAGGC GACTCTTTTT AGGGGAGCTA GGGCAGGACC AGGGCGATGG GCTGTTGCTA
GGTGCGATGG GGGGTACGGC GCCCGGGGCG GCGCTGCTGG TGCCTGTGGC GCTTGGCGGG
CATGTGGTGG GGGTTATCTG CGCCAGCGAT CAGAGGGGGA GGCTCGGCGG TGGGGTCTTC
GAGCTGCAGC GGGTGGCGGT GATGGCAGAG TTGAGCTTCG AGATGCTGTC ACTCAGGAAA
AGGATCATGA TTGGGTGA
 
Protein sequence
MSARLGEMLL KVGTLTEDQL EQVLNAQSIY GGRLGTNLVE MGFVEEEELA HVLSEQLGVP 
CAHPSELGSI PESLLKMFPL ELVQRYRVLP LALDGKRLTV AMTNPSDFKA LEDIAFVTGM
VIIPRVCSEL RLSIALERIF GVKRPMRYIP VEGGARSCFA ATLAQRGSAD PAWDGGASRH
SSERVSLEDM SERLAKALGE SEVVQAILSY LAGEFDRGAF LRLKGGCAHG VQAVDAGAPV
KGFPFFAAAV AEMRQVKRVV EERRLFLGEL GQDQGDGLLL GAMGGTAPGA ALLVPVALGG
HVVGVICASD QRGRLGGGVF ELQRVAVMAE LSFEMLSLRK RIMIG