Gene Gbem_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3924 
Symbol 
ID6780788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp4463632 
End bp4464117 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content60% 
IMG OID642769919 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_002140712 
Protein GI197120285 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0146493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA ATAATCGCGC TGTAGTGAAA CTGAAAGAGC GTTTCGCAAA TGCCCTCCTC 
GACTGCACGG AATATCGAGG CGAGGTGACG GTCACCGTGA AGAAAGAGAA CATCCTCGAG 
GTGCTCAAGT GCCTTAGGGA CGACCTCCGC TACAACTTCC TGACCGACGT CACCGCCGTC 
GACTACCTGG GCCAGGACCC GCGTTTCATG GTGGTCTACC ACCTCATGTC GATCCCGAAC 
AAGGACCGCA TCAGGGTGAA GGCGCCGCTG ACCGAGGCTG ACTGCTCCAT AGACTCCGCC 
ACCGCGCTCT GGAACTCCGC GGACTGGGTC GAGCGCGAGG CCTACGACAT GTTCGGCATC 
GACTTCAAGA ACCACCCGAA TCTGGTGCGC ATTCTGATGA CCGACGACTG GGTGGGGCAT 
CCCCTCAGGA AGGACTACCC GCTGCAGGGA CCGGACCGCG AACCGTACAA GGGTCGGCTG 
TCTTAG
 
Protein sequence
MAENNRAVVK LKERFANALL DCTEYRGEVT VTVKKENILE VLKCLRDDLR YNFLTDVTAV 
DYLGQDPRFM VVYHLMSIPN KDRIRVKAPL TEADCSIDSA TALWNSADWV EREAYDMFGI 
DFKNHPNLVR ILMTDDWVGH PLRKDYPLQG PDREPYKGRL S