| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3919 |
|---|
| Symbol | |
|---|
| ID | 6780783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 4456301 |
|---|
| End bp | 4457350 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642769914 |
|---|
| Product | respiratory-chain NADH dehydrogenase subunit 1 |
|---|
| Protein accession | YP_002140707 |
|---|
| Protein GI | 197120280 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACGC TAATCTTAGG ACTGCCGGTC GCGTACTACA TAGCCATGGT TGCCAAAGTG
CTCGTAGCCT TTGTCTTCGT GCTCCTGACC GTGGCCTACG CCACCTACGC GGAGCGCAAG
ATAATCGGGC ATATGCAGGT ACGCCTGGGT CCCATGAGGA CCGGCTGGCA CGGCCTGCTG
CAGCCGATCG CGGACGGCGT CAAGCTGTTC TTCAAGGAGG AGATCGTCCC GACTCAGGCA
AGCAAGTTCG CCTTCCTGAT CGCTCCCTTG GTCGCCTTGA TCCCGGCGTT CATATCCTTC
GCCGTCATCC CCTTTGGCGC CCCGGTGACC ATCGCCGGTT ACACGGTGCC GCTGCAGATC
GCCGCCTTCT ACGACCAGGC GGGCCAGCAG GTCTTCGACA TCAACGTCGG CGTCCTCTAC
ATCCTGGCCA TGGCCAGCCT CGGGGTCTAC GGCGTGGTGC TCGCGGGTTG GGCTTCCAAC
TCCAAGTACT CGCTCCTGGG TGGGCTTCGT TCCGCGGCCC AGATGATCTC CTACGAGCTC
GCTGCCGGCC TCGCGATCAT CGCCGTCTTC ATGCTCTCCG AGTCGCTGTC GCTGCACAAG
ATCGTTGCCG ACCAGGCCAA CGGCGCCTGG TACGTCTTCA AGCAGCCGCT CGCCTTCGTG
ATCTTCTTCA TCTGTTCGCT GGCTGAGATC AACAGGACCC CGTTCGACCT TCCCGAGGCG
GAGACTGAGC TCGTGTCCGG CTTCATCACC GAGTACTCCT CCATGAAATA CGCCATGTTC
TTCATGGCTG AGTACGCCAA CATGATCACC GTCTGCGCGG TCACCACCAC CCTGTTCCTG
GGCGGCTGGC ACGGCCCTGC GTTTCTCCCC GGCTGGTTCT GGTTCGTGGC CAAGGTGTAC
TTCCTGATCT TCTGCTGCAT GTGGATCAGG GCCACCTACC CGCGTTACCG CTACGACCAG
CTCATGCGTC TGGGTTGGAA GGTGTTCCTG CCGCTGACCC TGTTGAACGT GGTCGCCACC
GGCGTCTGGG TCATGGTCTT CAACAAGTAG
|
|---|
| Protein sequence | MDTLILGLPV AYYIAMVAKV LVAFVFVLLT VAYATYAERK IIGHMQVRLG PMRTGWHGLL
QPIADGVKLF FKEEIVPTQA SKFAFLIAPL VALIPAFISF AVIPFGAPVT IAGYTVPLQI
AAFYDQAGQQ VFDINVGVLY ILAMASLGVY GVVLAGWASN SKYSLLGGLR SAAQMISYEL
AAGLAIIAVF MLSESLSLHK IVADQANGAW YVFKQPLAFV IFFICSLAEI NRTPFDLPEA
ETELVSGFIT EYSSMKYAMF FMAEYANMIT VCAVTTTLFL GGWHGPAFLP GWFWFVAKVY
FLIFCCMWIR ATYPRYRYDQ LMRLGWKVFL PLTLLNVVAT GVWVMVFNK
|
|---|
| |