| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3915 |
|---|
| Symbol | |
|---|
| ID | 6780779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 4452893 |
|---|
| End bp | 4454896 |
|---|
| Gene Length | 2004 bp |
|---|
| Protein Length | 667 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642769910 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| Protein accession | YP_002140703 |
|---|
| Protein GI | 197120276 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGATT TAGTATGGTT GATCCCACTG TGCCCTCTCA TCGGCTCGGT CATCAACGGC
CTACTCGGCA AGAAGATCAA AAACGAAACG GTCATCGGTG GGATCGCAGC CGGGGCAGTC
TTCTGCTCCT TCCTGGTCGC CTGCGGAATC CTCTTCCAGC TCCTGAGTCT GCCGGGTGAG
GAGAGGGTGT TCCAGAAGAC CATCTTCACC TGGATCCAGT CAGGGACCTT CAAAGCCGAC
ATCGGCTTCC TGATCGATCC GCTCTCCGCA ACCATGCTGA TGATCGTAAC GGGGGTCGGC
TTCCTGATCC ACCTCTACTC CATCGGCTAC ATGCACGGCG AAGAAGGGTT CTACCGCTAC
TTCTGCTACC TGAACCTCTT TACCTTCTCC ATGCTCTGCC TGGTGTCGGG CAACAACCTG
CTCCTCATGT TCATCGGCTG GGAGGGCGTG GGTCTCTGCT CTTACCTCTT GATCGGCTAC
TACTTCCATA AGAAGTCGGC CGGCGACGCC GGTAAGAAGG CGTTCGTGAT GAACAGGATC
GGCGACTTCG GCTTCCTGCT CGGCGTCTTC ACCCTCTTCT GGTACCTGGG TGTCAACCAC
AACGTCTGGA CCATCAACTT CGTAGAGCTC GCCAAGAACG CCGACCTCCT GGTCCCGGGT
GCCGTAGTGA CCACCGTCTG CCTCTGCTTC TTCCTTGGTG CAACCGGTAA GTCCGCGCAG
ATCCCGCTCT ACACCTGGCT CCCGGACGCG ATGGAAGGCC CGACCCCGGT TTCCGCCCTC
ATCCACGCGG CCACCATGGT CACCGCCGGC GTCTACATGA TCGCCCGCAT GAACTTCATC
TACATCAAGA GCCCGACCGC GCTGCTCGTC ATCGCCTGCG TCGGCGCCGC CACCGCCCTC
TTCGCGGCGA CCATCGGCAC CGCGCAAAAC GACATCAAGC GCGTCCTGGC TTACTCGACC
GTTTCCCAGC TGGGCTACAT GTTCCTGGCC ATGGGGGTCG GCGCCTTCAC CGCCGGCGTG
TTCCACCTGA TGACCCACGC CTTCTTCAAG GCCTGCCTGT TCCTCGGTTC CGGCTCCGTC
ATCCACGCCA TGCACCACGC GCTGCACCAC GAGCATTCCG ACGCCGACCC GCAGGACATG
AGAAACATGG GCGGGCTTAA GTCCAAGATG CCGATCACCT TCCTGACCTT CCTGGTGGCG
ACCATCGCCA TCGCAGGTAT CCCGGGCTTC GCCGGCTTCT TCTCCAAGGA CGAGATCCTC
TGGCAGGCAT TTGCCAACCC GCACCACGGC AGCGCCAACC TGGTATTGTG GGGCTGCGGC
GCAGTCGCCG CAGGTCTCAC CGCATTCTAC ATGTTCCGCC TGGTGTTCAT GACCTTCTTC
GGCCAGACCC GTCTTTCCGA GAAGGCCTTC CACCACCTGC ACGAGTCCCC CTGGGTCATC
ACCGTGCCGC TCGTCTGCCT TGCCCTCCTC TCGCTGGTCG GCGGCTGGAT CGGCGTGCCC
AAGATCCTCG GCGACGTGCT GGGAGGTCTC CCGAACTACT TCGAAGGGTA CCTGGAGCCG
GTGTTCGCCT ACTCCAACGC CTACGTGCTG CATAACGTAC ACGGCGCACA TCCGAGCCAT
GCCGTCGAGT GGGGCCTGAT GGGCACCTCC GTGGTCATCG CCTGCGCCGG CATCGGCCTG
GCCGCCGGCC TCTACCTGAT CGCTCCGAGC GTCCCCGAGA AGTTCGTGGC GACCTTCCCG
GTGCTGCATC GTGCCGTGTA CAACAAGTGG TACATCGACG AAATCTACGA CTTCGTTTTC
GTCAACCCCT GCAAGGCCCT GGGCAACTTC CTCTGGAAAG GGTTCGACGT GGTAGTGATC
GACGGCATCG TGAACGGGGT AGCGGCGGTG GTCCGCGGCT TCAGCGGCAT CCTGCGCTAC
GTGCAGACCG GCTTCGTTCA CAACTACGCC TTCTCCATGG TGATCGGCGT GGTGGTCATC
GTAGGCGTGT ATCTCTTCCG CTAA
|
|---|
| Protein sequence | MFDLVWLIPL CPLIGSVING LLGKKIKNET VIGGIAAGAV FCSFLVACGI LFQLLSLPGE
ERVFQKTIFT WIQSGTFKAD IGFLIDPLSA TMLMIVTGVG FLIHLYSIGY MHGEEGFYRY
FCYLNLFTFS MLCLVSGNNL LLMFIGWEGV GLCSYLLIGY YFHKKSAGDA GKKAFVMNRI
GDFGFLLGVF TLFWYLGVNH NVWTINFVEL AKNADLLVPG AVVTTVCLCF FLGATGKSAQ
IPLYTWLPDA MEGPTPVSAL IHAATMVTAG VYMIARMNFI YIKSPTALLV IACVGAATAL
FAATIGTAQN DIKRVLAYST VSQLGYMFLA MGVGAFTAGV FHLMTHAFFK ACLFLGSGSV
IHAMHHALHH EHSDADPQDM RNMGGLKSKM PITFLTFLVA TIAIAGIPGF AGFFSKDEIL
WQAFANPHHG SANLVLWGCG AVAAGLTAFY MFRLVFMTFF GQTRLSEKAF HHLHESPWVI
TVPLVCLALL SLVGGWIGVP KILGDVLGGL PNYFEGYLEP VFAYSNAYVL HNVHGAHPSH
AVEWGLMGTS VVIACAGIGL AAGLYLIAPS VPEKFVATFP VLHRAVYNKW YIDEIYDFVF
VNPCKALGNF LWKGFDVVVI DGIVNGVAAV VRGFSGILRY VQTGFVHNYA FSMVIGVVVI
VGVYLFR
|
|---|
| |