Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3896 |
Symbol | |
ID | 6780760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4432792 |
End bp | 4433391 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642769891 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002140684 |
Protein GI | 197120257 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.971829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA CGGAATGTCA CAAGAAGCTT ATGGAGGTGG GAACGCAGCT GTTCTCGGAG AGGGGGCTAA AGGGGGTAAG CATCCGGGAG CTCTCGCTCG CGGCGGGGAC CAGCATCTCA ATGATCTCCT ACCATTTCGG CAGCAAGGAA GGGCTCTATC AGGCGGTGTT GCAGCAGCAG TTCGCCTGTT TCAAGGAAAT CCATGAGATC AGGCAGCGCG TGACGGACCC GGTGGAGATG GTAAAGAGCT ATCTGCTCTG GACCTTCGGG CGCCACAGAA ACAACCCGTA CCTGCTCCGC TTTTACACGA GCGAGTTGAC CAACCCGACG GCGTTTTTCG AGCCCTTGGT GATGCCGGTA ATCGACGAGG TCATCGTGAC CATGGCGGGG GCGATCGAGG AGGGGATCCG GCAGAAGAAG TTCCGGGAGG ATGTCGATCC CACCAACGCG GCACTGGCGC TGGCGGGGAT GGTGAATTAC TTCTTCCTGA GCAGCCTGGC GACCAGGAAC CTGATCAGCC ATTCCCCCGA AAAGGACGAA ATGCTGGTGC AGCAGTACCT GGACATCTTC ACGCGGGGAA TCGGCGCCTC AAGCGGATGA
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Protein sequence | MEKTECHKKL MEVGTQLFSE RGLKGVSIRE LSLAAGTSIS MISYHFGSKE GLYQAVLQQQ FACFKEIHEI RQRVTDPVEM VKSYLLWTFG RHRNNPYLLR FYTSELTNPT AFFEPLVMPV IDEVIVTMAG AIEEGIRQKK FREDVDPTNA ALALAGMVNY FFLSSLATRN LISHSPEKDE MLVQQYLDIF TRGIGASSG
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