Gene Gbem_3859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3859 
Symbol 
ID6780723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4398243 
End bp4399163 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content66% 
IMG OID642769854 
ProductHpcH/HpaI aldolase 
Protein accessionYP_002140647 
Protein GI197120220 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID[TIGR01588] citrate lyase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGATT ACAAGCTCAG GCGCTCGCTT TTGTACGTCC CGGGCAACAT GCCCTCCATG 
CTGCAAAACA TCCCCATCTT CAACTGCGAT TCCGTGATCA TCGACCTGGA GGACGCGGTT
CCGCTCTCCG AGAAGGACGC GGCGCGCCAC CTGGTGAAGC GCTTCCTCAT GCAGTACACC
GACCGCAACA AGGAGCTCCT GGTCCGGATC AACCCGCTCG ATACCCGCTG GGGGTACGAG
GACCTGAAGG TGGTGCTCCC GGCCATGCCG GATGGCATCC GCCTCCCCAA GGCCGACACC
CCGGAGATCG TGGAGCGGCT GGACACGCTT TTGACCGAGT TCGAGGAGGA GCTCGAGGTC
GAGATCGGCC GCTTCGGCAT CCTTCCCTCC CTGGAGAGCG CGCTCGGCGT CATCAACGCG
GTGGGGATCG CCCGGAGCTC GCAGCGCATC TTCGCCCTCG CCTTCGGCGC CGAGGACTAC
ACCGCCAGCA TGGAGATCGA GAGAAGCCGC GGCGGCGAGG AGCTCTTCAA CGCCAGGACC
CGGGTCCTTT GGGCCGCCAA GGCGAACGGG ATCCAGGCGC TCGACACCAT CTTCGCCGAC
GTGGGGGACA TGGAGGGGCT TAGGGCCGAG ACCGAGCTGG CCAAGAGGCT CGGCTACACC
GGCAAGTGCC TGGTGAACCC GCGCCAGATC GAGGTGGTGC ACGAGGTCTT CGCCCCCAAA
AAGCACGAGG TGGAGTACGC CCTGCAGGTG ATCGAGGCGA TCCAGCGGGC GCGGCAGCTT
GGTACCGGCG TCATTTCCCT CGGGGGGAAG ATGGTGGACG CCCCGGTGGT GAAGCGGGCG
GCGCGCGTGC TGAGGACCGC CTACGCCCAC GGCATGGTCG ACACCCTGAT AGACGAGGAG
GCGATACATG GCGCTCAATA G
 
Protein sequence
MPDYKLRRSL LYVPGNMPSM LQNIPIFNCD SVIIDLEDAV PLSEKDAARH LVKRFLMQYT 
DRNKELLVRI NPLDTRWGYE DLKVVLPAMP DGIRLPKADT PEIVERLDTL LTEFEEELEV
EIGRFGILPS LESALGVINA VGIARSSQRI FALAFGAEDY TASMEIERSR GGEELFNART
RVLWAAKANG IQALDTIFAD VGDMEGLRAE TELAKRLGYT GKCLVNPRQI EVVHEVFAPK
KHEVEYALQV IEAIQRARQL GTGVISLGGK MVDAPVVKRA ARVLRTAYAH GMVDTLIDEE
AIHGAQ