Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3859 |
Symbol | |
ID | 6780723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4398243 |
End bp | 4399163 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642769854 |
Product | HpcH/HpaI aldolase |
Protein accession | YP_002140647 |
Protein GI | 197120220 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | [TIGR01588] citrate lyase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGATT ACAAGCTCAG GCGCTCGCTT TTGTACGTCC CGGGCAACAT GCCCTCCATG CTGCAAAACA TCCCCATCTT CAACTGCGAT TCCGTGATCA TCGACCTGGA GGACGCGGTT CCGCTCTCCG AGAAGGACGC GGCGCGCCAC CTGGTGAAGC GCTTCCTCAT GCAGTACACC GACCGCAACA AGGAGCTCCT GGTCCGGATC AACCCGCTCG ATACCCGCTG GGGGTACGAG GACCTGAAGG TGGTGCTCCC GGCCATGCCG GATGGCATCC GCCTCCCCAA GGCCGACACC CCGGAGATCG TGGAGCGGCT GGACACGCTT TTGACCGAGT TCGAGGAGGA GCTCGAGGTC GAGATCGGCC GCTTCGGCAT CCTTCCCTCC CTGGAGAGCG CGCTCGGCGT CATCAACGCG GTGGGGATCG CCCGGAGCTC GCAGCGCATC TTCGCCCTCG CCTTCGGCGC CGAGGACTAC ACCGCCAGCA TGGAGATCGA GAGAAGCCGC GGCGGCGAGG AGCTCTTCAA CGCCAGGACC CGGGTCCTTT GGGCCGCCAA GGCGAACGGG ATCCAGGCGC TCGACACCAT CTTCGCCGAC GTGGGGGACA TGGAGGGGCT TAGGGCCGAG ACCGAGCTGG CCAAGAGGCT CGGCTACACC GGCAAGTGCC TGGTGAACCC GCGCCAGATC GAGGTGGTGC ACGAGGTCTT CGCCCCCAAA AAGCACGAGG TGGAGTACGC CCTGCAGGTG ATCGAGGCGA TCCAGCGGGC GCGGCAGCTT GGTACCGGCG TCATTTCCCT CGGGGGGAAG ATGGTGGACG CCCCGGTGGT GAAGCGGGCG GCGCGCGTGC TGAGGACCGC CTACGCCCAC GGCATGGTCG ACACCCTGAT AGACGAGGAG GCGATACATG GCGCTCAATA G
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Protein sequence | MPDYKLRRSL LYVPGNMPSM LQNIPIFNCD SVIIDLEDAV PLSEKDAARH LVKRFLMQYT DRNKELLVRI NPLDTRWGYE DLKVVLPAMP DGIRLPKADT PEIVERLDTL LTEFEEELEV EIGRFGILPS LESALGVINA VGIARSSQRI FALAFGAEDY TASMEIERSR GGEELFNART RVLWAAKANG IQALDTIFAD VGDMEGLRAE TELAKRLGYT GKCLVNPRQI EVVHEVFAPK KHEVEYALQV IEAIQRARQL GTGVISLGGK MVDAPVVKRA ARVLRTAYAH GMVDTLIDEE AIHGAQ
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