| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3857 |
|---|
| Symbol | |
|---|
| ID | 6780721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 4396249 |
|---|
| End bp | 4396743 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642769852 |
|---|
| Product | Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase |
|---|
| Protein accession | YP_002140645 |
|---|
| Protein GI | 197120218 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
|---|
| COG ID | [COG3697] Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) |
|---|
| TIGRFAM ID | [TIGR03124] holo-ACP synthase CitX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTAG ACGCGTTAAG GAATAGCCTT TTGGAGGCGA GGGACTGCCG GCAGGCCCTT
CTGGACGGGA TGTTCCCCAC CCAGTTCCCG GCCACGGTGA TGCTCTCCTT GAACCTGCCG
GGGACGGAGA AGACCGGGGA GCGGGCGGAG CGCCTGTTCC AATGGGGCGA GAAGGCGCTT
CTGGGCGCGC TGAAGACGAC GGACGCCGTG CGCGGATGCG ACGACCTCGG GCCCTTCGCC
ATCTACCGCA CCCGCCTCCC TTCGAAACAG GTGAAGCGGC TCGGGATCTC CCTGGAGTCG
ATGCATCCGG CGGGAAGGCT CCTAGACCTC GACATCTACG ACCATGCCGG CCGCCCCGTT
TCCCGGGTCG GGCTGGATAT CGCGCCCCGC GCCTGCCTCA TCTGCCCCGA ACCCGCCCTC
GCCTGCATCC ATGCCAGGCG CCACCAAAGC GAGGAGCTGA TGCTGCGCGC CCGGAGGATC
ATCGATGCGC TCTGA
|
|---|
| Protein sequence | MPLDALRNSL LEARDCRQAL LDGMFPTQFP ATVMLSLNLP GTEKTGERAE RLFQWGEKAL
LGALKTTDAV RGCDDLGPFA IYRTRLPSKQ VKRLGISLES MHPAGRLLDL DIYDHAGRPV
SRVGLDIAPR ACLICPEPAL ACIHARRHQS EELMLRARRI IDAL
|
|---|
| |