| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3838 |
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| Symbol | |
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| ID | 6780702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4376676 |
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| End bp | 4378247 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642769833 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_002140626 |
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| Protein GI | 197120199 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGAAG GCCTTAAAAA ACTGCTGGAA CCTTTTCTCG CCCTTTCGAC CGCCAAGCGG
CTCGTGGTAG GCGGGGTGGC GCTCGCCTCC CTGCTCGGCT TCGCCGCGCT GATCGCCGTG
GCCAACAAGA CCGATTACCG GCCGCTGTTC GCCAACCTGA CCCAGGAGGA CGCCGGCGAG
ATCGTCAAAA AATTGAAGGA GCAAAAGGTC CCGTACCAGA TCTCCCCGGA CGGCAAGGCG
ATCCTGGTCC CCTCGGACAA CGTCTACGAC CTGCGGCTCT CTCTGGCCAG CGACGGGCTC
CCCCAGGGAG GGGGCGTCGG CTTCGAGATC TTCGACCGGA AGAACTTCGG CATGACCGAG
TTCGTGCAGA AGCTCAACTA CCAGCGGGCG CTGCAGGGTG AGCTTGGGCG CACCATCGCC
CAGATCGCCG GCGTGGAGTC GGCCCGGGTG CACCTGGCCC TGCCGGAGAA GGCGCTGTTC
AAGGATCAGG AAAAGCCCGC CACCGCCTCC GTGGTGCTCA AGATGAAGTC GAACCGGCAG
CTTAGGGAGG GGGAGGTGCA GGGGATCGTG CACCTGGTCG CCTCCTCCAT CGAGGGGATG
GACCCGGAGC AGGTGACCGT CCTGGATACC CGGGGCAAGG TCCTCTCCTC CCATTCCCCC
AACGACCCGA CCAGCAAGGT GGCCGGCGCC CGCCAGGACA CCCAGCGCGC CTTCGAGAAG
ACCGAGGAGG AGAAGCTGCA GTCGCTTCTG GACCGCGTGG TAGGCTCGGG GAAATCCGTT
GCGCGCGTCT CGGCGAGCTT CGACTTCAAG CAGGTCGAGA AGTACGAGGA GCGCTACGAC
CCGGAAAGCG CCGCGGTGAG AAGCGAGCAA AGAAGCGAGG AGAAGGGGGG GGGCAGCAGC
ACCGCCAGCG GCGTCCCCGG CGTCCAGTCC AACATGGGGC GCGCCCAGGG TGCCGCGGGG
AGCACCACCG GCGGCGGTTC CAAGACCGAC GAGACGCTGA ACTACGAAGT GAGCCGCTCC
ACCGCGAGGA TCATCGAGCC GGTGGGGTCG CTCTCCAAGG TGTCGGTGGC GATCCTCGTG
GACGGCAAGT ACGAGCTCTC GCCGGGGGCC AAGCCGGGCG CCACCCCGAA GTACCAGCCG
AGGAGCCCCG ACGAGATGCA GAAGATCGAG TCGCTGGTGA AAAGCGCGGT CGGCTTCAAC
GCCGAACGCG GCGACCAGGT CACCGTGGCC AACATCCCCT TCCAAGAGAC CGGGGACCAG
GGTGGGGAGC AGCCGTCCTG GTACGACGCC CCCATCGTGC AGACGCTGAT CAAAAACGGG
CTGATCGGGC TCGCTTTCCT GGCGCTGCTC TTTTACGTGA TCCGTCCGCT CATGAAGATG
CTCAAGATCG AGAAAGCGGC CCACCACTTC CTCCCCATCC AGGACGACGT GGAGCAGCAG
CAGATGCTCG AGATGCAGAA GGTCGAGCAC GAGAAGATGA GAGTCACCCA GCTCGAGCTG
GTCGAGAAGG TGAAGCAGGA CCCCTACCAG GCAGCCCAGA TCCTTCAGAA CTGGCTAACG
CGCAAGGACT AG
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| Protein sequence | MPEGLKKLLE PFLALSTAKR LVVGGVALAS LLGFAALIAV ANKTDYRPLF ANLTQEDAGE
IVKKLKEQKV PYQISPDGKA ILVPSDNVYD LRLSLASDGL PQGGGVGFEI FDRKNFGMTE
FVQKLNYQRA LQGELGRTIA QIAGVESARV HLALPEKALF KDQEKPATAS VVLKMKSNRQ
LREGEVQGIV HLVASSIEGM DPEQVTVLDT RGKVLSSHSP NDPTSKVAGA RQDTQRAFEK
TEEEKLQSLL DRVVGSGKSV ARVSASFDFK QVEKYEERYD PESAAVRSEQ RSEEKGGGSS
TASGVPGVQS NMGRAQGAAG STTGGGSKTD ETLNYEVSRS TARIIEPVGS LSKVSVAILV
DGKYELSPGA KPGATPKYQP RSPDEMQKIE SLVKSAVGFN AERGDQVTVA NIPFQETGDQ
GGEQPSWYDA PIVQTLIKNG LIGLAFLALL FYVIRPLMKM LKIEKAAHHF LPIQDDVEQQ
QMLEMQKVEH EKMRVTQLEL VEKVKQDPYQ AAQILQNWLT RKD
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