Gene Gbem_3827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3827 
Symbol 
ID6780691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4366409 
End bp4367386 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content62% 
IMG OID642769822 
Productflagellar motor switch protein FliM 
Protein accessionYP_002140615 
Protein GI197120188 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAC TTCTCACCAA GGAAGAAATA GATGCCCTGG TCGCGGCGGT TTTCGACGGG 
ACCCTGGTTC CGGAAAACGA GCTGGCCAAG GAAGGGCCGC AGGCCGAGCA GTTCGACCTG
CTGGACATCG AGGCGCACCG CGCCATCCCG AACCTTGACA TCGTCTACGA CGGATTCATC
CGGTACAACA GGGTCACCAT GTCCAACCGG CTGGGGCGGA TGGTGGACAT CAAGAAGGAG
GAGGCGGTCC CCTACAAGTT CGGGGACTTC CTGAGCGTGC TCCCGAACCC CGTCTGCATG
GCGATCTACA AGATGGACCC CCTGAAGGGG GCCGCCCTGA TCGCCTTCGA CGCCACCTTG
GTCTTCACCA TCGTGGACAG CATCCTCGGG GGGAGCGGAG TGCAGCCCCA AGGGATGAAC
CGGCTCTTCA CCTCGATCGA GCTGAGGCTC GTGGAGAAGA TCGTCAAGGA CGCGCTGGCG
GACCTGGAGA AGGCGTGGGC GCCGCTTTGC CCGGCCAGCA TGAACCTGCT CCGCCTGGAG
ATGAACCCGC GCCTGGTCAA CATCGTCCCC CCCGAGTACC AGGTGGTGAC CATGTCGATG
AAGATCCAGA TCGAGGAGAC GGTGGGGAGC ATGATCCTCG CCATCCCCTT CCTTACCATC
GAGCCGATCC GCGACAAGCT GAAGCGCGGC GTCCAGATGG ACATGATGGC TGTGGACCCG
TTCTGGTCCT ACCGGCTTTC CGAGGAGCTC ATGGGCGCGC CCATGGATCT CTCGGTCGAG
ATGGGAGGGG CGACCATCTC GCTTTCGGAC CTGCTGCACT TAACGCCGGG AGACACCATC
ATGCTGGAGG CAAGCGGCAA GGACGAGCTG ACGGTGAAGG TGGGCGGCAC CAAGAAGTTC
ATGGGGATCG CCGGGGTAAG CGGCGGCAAC AAGGCAGTAC AGATAACCCG GGCCCTGAAT
GCAGGAGGTG AAGATTGA
 
Protein sequence
MEKLLTKEEI DALVAAVFDG TLVPENELAK EGPQAEQFDL LDIEAHRAIP NLDIVYDGFI 
RYNRVTMSNR LGRMVDIKKE EAVPYKFGDF LSVLPNPVCM AIYKMDPLKG AALIAFDATL
VFTIVDSILG GSGVQPQGMN RLFTSIELRL VEKIVKDALA DLEKAWAPLC PASMNLLRLE
MNPRLVNIVP PEYQVVTMSM KIQIEETVGS MILAIPFLTI EPIRDKLKRG VQMDMMAVDP
FWSYRLSEEL MGAPMDLSVE MGGATISLSD LLHLTPGDTI MLEASGKDEL TVKVGGTKKF
MGIAGVSGGN KAVQITRALN AGGED