Gene Gbem_3798 details

Gene Information

• Locus tag: Gbem_3798
• Symbol: ispF
• ID: 6780662
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 4336946
• End bp: 4337434
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642769793
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_002140586
• Protein GI: 197120159
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.164
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCATA TGCGTATCGG GCACGGTTAC GACGTTCACA GGCTGGTGGA AGGGCGCAAG 
CTGATCCTCG GAGGGGTCGA CGTCCCTTAC GCCAAGGGGC TCCTCGGGCA CTCCGACGCG 
GACGTACTTT TGCACGCCAT CTCCGACGCC ATCCTGGGAG CCATCGGCGA GGGGGACATC 
GGCCGCCACT TCCCGGACAC CGATCCCGCC TACAAGGGGG CCGACAGCAT CAAGCTCCTG 
CAGCACGTCA TGGGGCTTGC CGACGCGAAG GGGTACCGCA TCGGCAACGT CGACGCCACC 
GTCGTGGCCC AGCGTCCGAA GCTGGCCCCT TTCATCCAAC AGATGCGGCA GAACATCGCC 
CGGGCGCTCG CCACCGACGA CGACCGGGTC AACGTGAAGG CGACCACGAC CGAGGAGCTC 
GGTTTCGCCG GCCGCGGCGA GGGGATCGCC GCCTACGGAG TCGCCTTGTT GGAGCGCAAG 
GAGCGCTAG 

 

Protein sequence

MSHMRIGHGY DVHRLVEGRK LILGGVDVPY AKGLLGHSDA DVLLHAISDA ILGAIGEGDI 
GRHFPDTDPA YKGADSIKLL QHVMGLADAK GYRIGNVDAT VVAQRPKLAP FIQQMRQNIA 
RALATDDDRV NVKATTTEEL GFAGRGEGIA AYGVALLERK ER