| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3796 |
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| Symbol | |
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| ID | 6780660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4334545 |
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| End bp | 4335951 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642769791 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_002140584 |
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| Protein GI | 197120157 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.245945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGAGG AGGTGCCCGT GCAGCAGCTT AAAATGATCC CGAAGGTTGA TCGGGTCCTC
GAGTGGGAGG CGGTGCGCAA GCTTCTGGCC ACCTACCCAA GGGAGTTGGT GCTGCGAGCC
GTCCGCAGCG TGCTGGATAA GCTGCGCAGC GGCGCCCGTG CCGGCGGTCT CGACGATTCG
GCTTTCCTTG AACCCGCAGT CTGCGCCGCA GTGGCCCACG AACTAGCCCA GCTCTCCAGG
CCGAGCCTCC AGAGGGTGAT CAACGGCTCC GGCATCGTGA TACACACAAA CTTGGGACGC
TCCATCCTCC CCGAAGCCGC CCGCAACGCC CTTAACACCA TAGCCTTCTC CTATTCGAAC
CTTGAGTTCG ACCTCGAAGC CGGGGTGCGC GGCAGCCGCT ACAGCCACGT GGAGGCTCTC
CTTTGCGAAC TGACCGGGGC CGAGGCCGCC ATTGTGGTCA ACAACAACGC CGCGGCAGTG
CTTCTCTCGC TGAGTTCGAT GGCCGCCGGC CGCGAGGCGG TGGTTTCGCG CGGGGAGCTG
GTGGAAATCG GCGGCTCTTT CCGCATTCCC GAGGTGATGC GGCTTTCGGG CGTGACGCTG
AGGGAGGTGG GGACAACGAA CCGCACCCAT CCCAGGGACT ACAGCAGCGC GGCAAACGAG
CAGACCGCAG TGTTTCTCAA GGTGCACTGC AGCAATTTCG CCGTCCTTGG CTTCACCGCA
GAGGTGACCG CCCAGGAGTT GGTAGCGCTT GGGGCCGCGG CCGGGGTCCC GGTATTGGCC
GACATGGGAA GCGGCAACCT GATCGACCTC TCGGGACGCT TGCCGGTCCC GGAGCCGACG
GTGCAGGAGT TCGTGCGCGC GGGGGTCGAC GTCATCACCT TCAGCGGCGA CAAGCTCCTG
GGAGGCCCGC AGGCAGGGAT CATCGTCGGG AAAAAACCGT TTATCGAGGC GATGAAGAAG
CACCAGTTGC TGCGCGCGCT CAGGATGGAC AAGCTCACCC TCGCGAGCCT GGAGGCGACG
CTCGCCCTGT ACCGGGACGA GATGGTCGCG CTCAAGGAAG TGCCGACGCT GAGGATGCTG
ACCGCCACCC TCCCCGAGTT GACGGCGCGG GCGAAAAAGA TCAGCGCATT TTTGCGCCGC
CGCACGCCGC AGGGGATCAG CTTCAAGCTG AGCGAAGGGT TCTCCCAGGC AGGAGGCGGG
ACACTGCCGC TTTTGAACCT GCCCAGCATG CTGATTGAGG TCGCCGTCGA GGGGCTCTCC
CCCAACGACA TCGAGTCGCG GCTCAGGAAA TCGGAGATCC CGGTCATCGG CAGGATCAAC
AAGAACGCCT TCCTGCTCGA CCCCCGCACC CTGCTGGACA GCGACCTTTC GGATCTGGCC
GCGGCCATCT CCGCCCTGGC AGGCTAG
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| Protein sequence | MQEEVPVQQL KMIPKVDRVL EWEAVRKLLA TYPRELVLRA VRSVLDKLRS GARAGGLDDS
AFLEPAVCAA VAHELAQLSR PSLQRVINGS GIVIHTNLGR SILPEAARNA LNTIAFSYSN
LEFDLEAGVR GSRYSHVEAL LCELTGAEAA IVVNNNAAAV LLSLSSMAAG REAVVSRGEL
VEIGGSFRIP EVMRLSGVTL REVGTTNRTH PRDYSSAANE QTAVFLKVHC SNFAVLGFTA
EVTAQELVAL GAAAGVPVLA DMGSGNLIDL SGRLPVPEPT VQEFVRAGVD VITFSGDKLL
GGPQAGIIVG KKPFIEAMKK HQLLRALRMD KLTLASLEAT LALYRDEMVA LKEVPTLRML
TATLPELTAR AKKISAFLRR RTPQGISFKL SEGFSQAGGG TLPLLNLPSM LIEVAVEGLS
PNDIESRLRK SEIPVIGRIN KNAFLLDPRT LLDSDLSDLA AAISALAG
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