| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3738 |
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| Symbol | |
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| ID | 6780602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4264441 |
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| End bp | 4266000 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642769733 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_002140526 |
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| Protein GI | 197120099 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCAG CAGCCTCACA CGGAACCACG GTTCACCAAT ATATGGAGTA TTTCGTGCGG
CAAGACCCCG ACGCGCTCTG CTGTTCCTTG CGCGTCAAAG GGGCCTGGGC AGATTACTCA
CGCCTCGAAT TCTGGGACCA CGTCTGCCGG TATGCCACTC TCTTCTTAGA TCTAGAGCAC
CAGAGCGTCA TCCTCTTCGC CAAGAAGCTC GACATCCACC TGCTGACCGC CTACATCGGA
GCCATGAAGG CGGGGCATCT TCCGGCGCAG GTCAGTTTCC CGTCGGCAAA AGTCAACGAA
ACCGAATATC GGAAGAAGAT CGACCACATC AGGGAGATCA CCCGGTTCGG GGCGGTCTTC
ACCGAGGCGG AGGAAAATCA CCTGCAGAAG TACCTCGGCT CGGAGCTGGT ATTTACCCCC
GCCTGCGAAC CGGCCGAAGG GCGCGCCCTC CCCGCAGCGG CGGCAAACCC CGAGAACGCG
CTGATCCAGT TCTCCTCCGG TTCCACGGGG CTGCAAAAGG GTGTGATCCT CACCCACGAG
GCGGTGGTCG AGCACATGCA AAGCTACGCC TCCAGCCTGA GGGTCGGGAA GGGGGACGCC
ATCGCCACCT GGCTTCCCCT CTACCACGAC ATGGGGCTCA TCGCCTGCTA CCTGATGCCG
CTCATGACCG GGATCCCCTT CTATCAGCTC GACCCCTTCG ACTGGATCAT GCAGCCGGAC
CTCCTGCTCC AGTTGATCGA GGAGAGAAGG CCCACCATCT GCTACCTCCC GAACTTCACC
TACCAGGTGC TGGCCAATAA GGGGAAGGTG CGGGATCTCT CCAGCGTCAG GCTCTGGATC
AACTGCTCGG AGCCGGCGCG GGCCAAGAGC CACCAGATGT TCGCCCAACG CTTCCCAAGC
GTGAGGCGCG ACGCGCTCAC CGTCTGCTAC GCCCTTGCCG AGAACACCTT CGCCGCGACG
CAGACGCTCC CCTGGGAGGG GAATTCGACC AAGGTGCATC CCACCCGCAA CGTCCTCTCC
TGCGGCAAGC CGATCCCCGG CGTCGAGGTG CGCATCTTCG ATGCGATGGA GAACGGCGAC
GGCGAGATGG GGCTGCGCTC GCCGTTTCTC TACCACCGCT TCCTGGACGG GACGCGGCCG
CTCAGGGACG GCTTCTGCCT GACCGGTGAC CTGGGCTTCA TCGGGGAAGA CGGCGAGGTC
TACATCACCG GGCGCAAGAA GGACATCATC ATCGTGCACG GCAAGAACAT CTATCCGCAG
GACGTCGAGT ACGTCGCCTC GGAGGCCCCG GGCGCATACT CCGGGCGCAC CGTCTGCTTC
GGGATCTGGG ACGACGAGAT CGGGAGCGAG GAGCTCTACG TCATCGTGGA ACGCGAGAGC
ACTGCGAACC CGACCGCCAT CAAGATCGCC GTGCAGAAAG CGGTCATGGA GGAGGTGGGG
ACGGTGCCGA AGAGGGTCGA GGTGGTGGAG CATATGACGC TGGTCAAGAC CTCGAGCGGC
AAGATCTCCC GCTCCCGCAA CAAGGAACTC TACCAGGGCA AAGGTTTCCA ACTTCTATGA
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| Protein sequence | MDAAASHGTT VHQYMEYFVR QDPDALCCSL RVKGAWADYS RLEFWDHVCR YATLFLDLEH
QSVILFAKKL DIHLLTAYIG AMKAGHLPAQ VSFPSAKVNE TEYRKKIDHI REITRFGAVF
TEAEENHLQK YLGSELVFTP ACEPAEGRAL PAAAANPENA LIQFSSGSTG LQKGVILTHE
AVVEHMQSYA SSLRVGKGDA IATWLPLYHD MGLIACYLMP LMTGIPFYQL DPFDWIMQPD
LLLQLIEERR PTICYLPNFT YQVLANKGKV RDLSSVRLWI NCSEPARAKS HQMFAQRFPS
VRRDALTVCY ALAENTFAAT QTLPWEGNST KVHPTRNVLS CGKPIPGVEV RIFDAMENGD
GEMGLRSPFL YHRFLDGTRP LRDGFCLTGD LGFIGEDGEV YITGRKKDII IVHGKNIYPQ
DVEYVASEAP GAYSGRTVCF GIWDDEIGSE ELYVIVERES TANPTAIKIA VQKAVMEEVG
TVPKRVEVVE HMTLVKTSSG KISRSRNKEL YQGKGFQLL
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