| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3711 |
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| Symbol | thyX |
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| ID | 6780575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4235938 |
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| End bp | 4236627 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642769706 |
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| Product | FAD-dependent thymidylate synthase |
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| Protein accession | YP_002140499 |
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| Protein GI | 197120072 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000128726 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGTTG CCCTTCTGCA ACACACCCCC GAGCCCGAAC GGAGCATCGC GCTGGCCGCG
AGGCTTTGTT ATTCGCAGGT CGACATCGAG GCGCTCAAGG AGAAGCTTTC CGGCGCCGAC
GTGAAAAAAT TCCTGGACAA GATCATGTCG CTCGGGCACC AGTCGGTGCT GGAGCACGCA
TCGTTCACCT TCGGGGTGGA CGGGATCTCG CGCGTCACCA GCCACCAGCT GGTGCGGCAC
CGGGTCGCTT CCTTTTCCCA GCAGTCCCAG CGCTACGTCT CCCACAAGGA ACGCTTCGCT
GTGGTCACCC CCCCGACTAT TTCCGAAAAT CCCGAGCATG CCCGCCTCTT CGAGGCGCAG
GTGGCGGCTT TGCACGCGGC CTACGGGGCC CTGGTCGAGG CGGGTGTCCC GGCCGAGGAC
GCACGCTACC TGCTGCCCAA CGCCACCGAG ACCAAGATCA TCATCACCAT GAACGCCCGT
GAGCTCTTGC ACTTCTTTGC CGTGCGCTGC TGCGAGCGCG CCCAGTGGGA GATCAGGGCC
ATGGCGGTGG AGATGCTCAG GCAGGTTCGG CCGATAGCCC CCACCGTCTT CGCCAAGGCC
GGACCCGGCT GCCTTGCTGG CCCCTGCCCG GAAGGTGCCA TGTGCTGCGG CAAGATGGCA
CAGGTGAGGG AATTCTTCGG GGAGATGTGA
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| Protein sequence | MKVALLQHTP EPERSIALAA RLCYSQVDIE ALKEKLSGAD VKKFLDKIMS LGHQSVLEHA
SFTFGVDGIS RVTSHQLVRH RVASFSQQSQ RYVSHKERFA VVTPPTISEN PEHARLFEAQ
VAALHAAYGA LVEAGVPAED ARYLLPNATE TKIIITMNAR ELLHFFAVRC CERAQWEIRA
MAVEMLRQVR PIAPTVFAKA GPGCLAGPCP EGAMCCGKMA QVREFFGEM
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