| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3690 |
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| Symbol | |
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| ID | 6780554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4216562 |
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| End bp | 4218361 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642769685 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_002140478 |
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| Protein GI | 197120051 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.561714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCAT CCCCCATACA GATTCTCAAC GATGTCTTCG GCTTCAAGTC GTTCCGGTCG
CCGCAGCAGG AGATCGTGGA AACGGTCCTC TCCGGCAGGG ACGCTTTCGT CCTCATGCCG
ACCGGCGGCG GCAAATCGCT CTGCTACCAG GTCCCGGCCC TTTGCTTTCC CGGCACGGCC
TTGGTGATCT CCCCCCTCAT CTCGCTGATG AAGGACCAGG TCGACGCCCT GCGCGAGAAC
GGCATCTCCG CCGCGTGCTA CAACTCGGCG CTGGGCGAAG CAGAGGCGCG CCGGGTGCTG
GCCCAACTGC ACGCAGGCGA GCTGAAGCTC CTCTACGTCG CGCCCGAGCG GCTATTGAGC
GACGGCTTCC TGGAAAGGAT CAAGCAGCTC CCCATCTCCC TCTTCGCCAT CGACGAGGCG
CACTGCGTCT CGCAGTGGGG GCACGACTTC CGTCCCGAGT ACGCCCAGCT TGGCGTACTG
CGCGAGATAT TCCCCGAGAT ACCGATGATC GCGCTTACAG CGACGGCCGA CGCCCAGACC
AGGGGAGACA TACTTTCCCG GCTCGGGCTT CAGGGGGCGA CCTGCTACTG CGCCGGTTTC
GATCGCCCCA ACATCCGTTA CAGCGTCATC GACAAGAATA AGCCCTTCAG CCAGCTCACC
GGCTTTTTGT CCAGCCGCAA GGACGAGGCG GGGATAGTGT ATGCCCTGTC ACGGAAGCGG
GTCGAGGAGG TGGCCAAAAA GCTTTGCGCC GCCGGGATCA AGGCGGCCGC CTATCACGCC
GGGCTTCCGG ACAAGGAGCG GCATCGGGTC CAGGACGCCT TCCTCAAGGA CGACATCAAG
ATCGTCGTGG CCACGGTCGC CTTCGGCATG GGGATAGACA AGTCCAACGT CCGCTTCGTG
GTGCACTACG ACATGCCAAA AAGCATCGAG AGCTACTACC AGGAGACCGG GCGTGCTGGC
CGCGACGGGC TTCCTGCCGA CGCGCTGCTT TTGTTCGGTT ACGGCGACGT CGCCGTGGCC
CGCGGGCTCA TCGGCAACGG CGGCAACGCG GAGCAAAACC GGATCGAGCT GCACAAGCTC
AACTGCATGA TCGGGTTCGC CGAGGCCCAG ACCTGCCGGC GCCGGGTGCT GCTCGGCTAT
TTCGGGGACC GGCTGGAGCA GGACTGCGGC AACTGCGACA TCTGCGAGAG CCCGCCGGAG
CGCTTCGACG CAACCGAGGA TGCCCAAAAG GCGCTCTCCT GCGTCTACCG CGTTGGCCAG
CGCTTCGGGG TGGGGCACGT CATCGACGTG CTGCGCGGTT CGCAGAACCA CCGGATCCAG
GAGCTGAAAC ACGACCAGCT TTCCACCTTC GGCATCGGCA AGCAACACTC CCAGGAGTTC
TGGGGCAACC TGTTGCGCCA GTTGATCCAC CTGGGGTACC TGGAGCAGGA TCTGGCGAAT
TTCTCGGTGC TGAAATTGAC CGAGGGGGCG CGCCCGCTTT TGAGGGGGGA GCTGCGGCTG
GAGCTTGCCA GGCCGCGCGA TACCAAGGTA GTGGAGAAGA AGTCGGCCGC CAGGAAGCCG
AGCTACGATG GCGCGCTGTT CCAGGAGTTG CGGGAGCTCA GGAAGGGGAT CGCGGACGAG
CAGCAAGTGC CGCCTTTCGT GGTCTTTGCT GACGCGACGC TCGCCGAGAT GGCGGCGCAG
CTGCCCAAGG ACAAGTGGGA GTTGCTGAAG ATAACCGGGG TGGGGCAGCA CAAGATGGCT
CGCTACGGCG ACGCCTTCCT GCGGGTGATC AGGGAACATC TGGAGAAGGA GGCGAACTGA
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| Protein sequence | MPASPIQILN DVFGFKSFRS PQQEIVETVL SGRDAFVLMP TGGGKSLCYQ VPALCFPGTA
LVISPLISLM KDQVDALREN GISAACYNSA LGEAEARRVL AQLHAGELKL LYVAPERLLS
DGFLERIKQL PISLFAIDEA HCVSQWGHDF RPEYAQLGVL REIFPEIPMI ALTATADAQT
RGDILSRLGL QGATCYCAGF DRPNIRYSVI DKNKPFSQLT GFLSSRKDEA GIVYALSRKR
VEEVAKKLCA AGIKAAAYHA GLPDKERHRV QDAFLKDDIK IVVATVAFGM GIDKSNVRFV
VHYDMPKSIE SYYQETGRAG RDGLPADALL LFGYGDVAVA RGLIGNGGNA EQNRIELHKL
NCMIGFAEAQ TCRRRVLLGY FGDRLEQDCG NCDICESPPE RFDATEDAQK ALSCVYRVGQ
RFGVGHVIDV LRGSQNHRIQ ELKHDQLSTF GIGKQHSQEF WGNLLRQLIH LGYLEQDLAN
FSVLKLTEGA RPLLRGELRL ELARPRDTKV VEKKSAARKP SYDGALFQEL RELRKGIADE
QQVPPFVVFA DATLAEMAAQ LPKDKWELLK ITGVGQHKMA RYGDAFLRVI REHLEKEAN
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