Gene Gbem_3648 details

Gene Information

• Locus tag: Gbem_3648
• ID: 6780512
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 4175497
• End bp: 4175898
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642769643
• Product: tol-pal system-associated acyl-CoA thioesterase
• Protein accession: YP_002140436
• Protein GI: 197120009
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family; [TIGR02799] tol-pal system-associated acyl-CoA thioesterase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.233147
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGTAC GGATTTATTA CGAAGATACC GATGCTGGGG GGGTGGTGTA CCACTCCAAC 
TACATCAGCT ACATGGAGCG CGCGAGGACC GAGTTCCTCA GAAAGCACGG CCTCTCGGTG 
CGGGAGATGC ACGACATGGG GATCATCTTC CCCGTGGTGT CGATAGAGGC GAACTTCCGG 
GCGCCGGCGC GGCTGGACGA CCTTCTGGAA GTGCGGACGC AGATAGCGGC GCTGAAAAAC 
AGCTCCTTCA CCGCGGCGCA GCAGGTGGTG CGAAAAGAGG ACGGGAAGCT CCTGGTCGAA 
GCGAAGGTGA CGCTCGCCTG CGTGAACCCG GAGATGCGCC CCAGGCGCCT GCCGCAGGAG 
ATCCGCGACC TTTTCAGCTC GCTGATGGAA GAGACCGCAT AA 

 

Protein sequence

MEVRIYYEDT DAGGVVYHSN YISYMERART EFLRKHGLSV REMHDMGIIF PVVSIEANFR 
APARLDDLLE VRTQIAALKN SSFTAAQQVV RKEDGKLLVE AKVTLACVNP EMRPRRLPQE 
IRDLFSSLME ETA