| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3645 |
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| Symbol | gatB |
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| ID | 6780509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4169547 |
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| End bp | 4171013 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642769640 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_002140433 |
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| Protein GI | 197120006 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATC AGGTCGTCAT CGGGCTCGAG GTCCACACCC AGCTCACCAC CAACACCAAG
ATCTTCTGCG GCTGCTCGAC CCGCTTCGGG GCGGAGCCGA ACTCCCAGAC CTGCCCGGTC
TGCCTCGGCT TACCAGGCGC GCTCCCGGTA CTGAACCAGC AGGTGGTGGA ATACGCCATC
CGCGCCGGAC TCGCCACCAA CTGCTCCATC ACCAAAAGGA ACGTCTTCGC CCGGAAAAAC
TACTTCTACC CTGACCTCCC GAAGGGTTAC CAGATCAGCC AGTTCGACCT CCCCATCTGC
CAGCACGGCC ACCTGGACAT CGAGGTGGAG GGCGAAAAGA AACGGATCGG GATCACCCGC
ATCCACATGG AGGAGGACGC CGGCAAGTTG GTGCACGCTG ACATCCCCGG GGTGGACGAT
TCCTGCGTCG ACCTGAACCG CGCCTGCACG CCGCTACTGG AGATCGTCTC GGAGCCGGAC
ATGCGCTCCC CGGACGAGGC AATCGCCTAC CTGAAGAAGC TGCACCAGAT CGTCATGTAT
CTGGGGATCT GCGACGGCAA CCTGGAGGAA GGGAGCTTCC GCTGCGACGC GAACGTATCG
CTCATGCCGG TCGGCTCCAA CGTCTTCGGC ACCCGCGCGG AACTGAAGAA CATCAACTCC
TTCAAGTTCA TCAAGCAGGC AATCGAGTAC GAGATTGAGC GCCAGGCCGA GATCCTCGAC
GACGGCGGCA AGGTGGTCCA GGAAACCCGA CTTTTCGACC CGAACACCGG CACCACCCGC
TCCATGCGCG GCAAGGAGGA GGCGCACGAC TACCGCTACT TCCCGGACCC CGACCTGGTC
CCGGTGATCA TCTCGGACGA CTGGATCGAG AAGGTGCGCG GCGGGCTGCC CGAGCTTCCC
GAGGCGAAGC GCGCGCGCTT CATGTCGGAA GGAGGGGCCG TATTTGGCGG CTCTGCATTC
GGACTCCCCG AGTACGACGC CGAGGTCCTG GTGGCAAGCC GCGAGCTGGC GCAGTACTTC
GAGGACACGG TCGCGCTCTT CCCGCAGGCC AAGACCGTCT CCAACTGGGT CATGGGCGAA
GTCACCCGCG CCCTCAACGA CGACAACAAC CGCTCCATCG CCGAGTGCCC GGTCACCCCG
GCTCTCTTGG CCGACCTCCT GAAGCTGATG GAGAAAGGGA CCATCTCCGG CAAGATCGCC
AAGACCGTCT TCGACGAGAT GTACAAGACC GGCAAGGCGT CGGAGAAGAT CGTCGAGGAG
AAGGGTCTGG TGCAGGTCTC CGACACCGGA GCCATCGAGG CCATGGTGGA CGAGGTGCTG
GAGAAGAACC CCGGGCAGGT AGCCGAGTAC AGGGGTGGCA AAGAGACCCT TTTCGGCTTC
TTCGTGGGCC AAGTCATGCG CGCCTCCAAA GGGAAGGCGA ACCCCGCCGT CGTAAACGAA
CTGCTGCTAA AGAAACTCAA CAGCTAA
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| Protein sequence | MKYQVVIGLE VHTQLTTNTK IFCGCSTRFG AEPNSQTCPV CLGLPGALPV LNQQVVEYAI
RAGLATNCSI TKRNVFARKN YFYPDLPKGY QISQFDLPIC QHGHLDIEVE GEKKRIGITR
IHMEEDAGKL VHADIPGVDD SCVDLNRACT PLLEIVSEPD MRSPDEAIAY LKKLHQIVMY
LGICDGNLEE GSFRCDANVS LMPVGSNVFG TRAELKNINS FKFIKQAIEY EIERQAEILD
DGGKVVQETR LFDPNTGTTR SMRGKEEAHD YRYFPDPDLV PVIISDDWIE KVRGGLPELP
EAKRARFMSE GGAVFGGSAF GLPEYDAEVL VASRELAQYF EDTVALFPQA KTVSNWVMGE
VTRALNDDNN RSIAECPVTP ALLADLLKLM EKGTISGKIA KTVFDEMYKT GKASEKIVEE
KGLVQVSDTG AIEAMVDEVL EKNPGQVAEY RGGKETLFGF FVGQVMRASK GKANPAVVNE
LLLKKLNS
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