Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3644 |
Symbol | gatA |
ID | 6780508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 4167914 |
End bp | 4169371 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642769639 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_002140432 |
Protein GI | 197120005 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATTT TCGACCTAAC CATACACGAG CTGCATGAGA AGCTGAAGGC GAAGGAGGTC TCTTCCGTCG AGGCGACCCG CGCCATGCTG GACCGGATCG AGGCGGTGGA CAGCCAGGTG AACGCCTACA TCACCGTGAC CCCGGAGCAG GCGCTGGTAC AGGCTGAGGA CGCGGACCGC CGCATCGCCG CTGGCGAAAT CGCGCCTCTG ACCGGCATCC CGGTCGGCCT CAAGGACATA TTCGTCACCA AGGGAATCCG CACCACCTGC GGCTCGCGCA TCCTGGAAAA CTTCGTCCCC CCCTACGACG GCACAGCGGT AGCAAAGCTT AAAGAGCAGG GCGCGGTCAT CGTCGGCAAG CTGAACCAGG ACGAGTTCGC CATGGGCTCC TCCAACGAGT CGAGCTACTT CGGCCCCTGC AAGAACCCGT GGGATCTTTC CTGCACGCCG GGCGGCTCCT CCGGGGGCTC CGCCGCCGCC ATCGCCGCAC GCACCGCGAC CGCGACGCTC GGAACCGATA CCGGCGGCTC GATACGCCAA CCGGCCTCGC ACTGCGGCTG CGTGGGCCTG AAGCCGACCT ACGGCAGGGT CTCCCGCTAC GGCGTCATCG CTTACGCCTC CTCGCTGGAT CAGGTAGGCC CGCTCACCCG CGACGTTACC GACTCGGCAC TCCTTTTGGG AGCGGTGGCA GGTTACGACC CGATGGATTC CACCTCGGTC AACACCCCGG TCCCCGACTA CGTCGCCTCC CTCGCCAAAG GCGTAAAGGG TATAAAGATC GGCCTTCCCA AGCAGTACTT CATCGAGGGT CTCGACCCGG ACGTGAAGCG CGCCATGGAC GAGGCGATCG CCATGTACAA GAGCCTCGGC GCCGACATTC GTGAAGTGAG CCTCCCCAAC ACCGAGTACG CCGTCGCCAC CTACTACATC ATCGCCACCG CAGAGGCTAG CGCCAACTTG GCCCGCTACG ACGGCGTCCG CTTCGGGCAC CGCGCAGAGG ATGCCAGGGG CCTGGCGCAG ATGTACTCCA AGAGCCGCGC CGAGGGGTTC GGCCCCGAGG TTAAGCGCCG CATCATGTTG GGAACCTACG CCCTTTCCTC CGGCTACTAC GACGCCTACT ACGTCAAGGC GCAGAAGGTG CGCACCCTGA TCCAGCAGGA CTTCCTGAAC GCCTTTAAGG AAGTCGACGT GCTGTTGACC CCGATAGCGC CCACCCCGGC CTTCAAGATC GCGGAAAAGC TCGAGGACCC GCTGCAGATG TACCTCTCCG ACATCTTCAC CATTCCGGTG AACCTGGCCG GAACCTGCGG CATCTCCGTT CCCGCCGGGT TCAGCGCCGC AGGACTTCCC ATCGGGCTGC AACTGGTAGG GAAACCGTTC GGCGAGCAGG AAATCCTCAC CGCCGCGTAC TCCTTCGAAA GGGAGACGCA GTGGCACCTG AAGAAGGCGC CGCTGTAA
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Protein sequence | MEIFDLTIHE LHEKLKAKEV SSVEATRAML DRIEAVDSQV NAYITVTPEQ ALVQAEDADR RIAAGEIAPL TGIPVGLKDI FVTKGIRTTC GSRILENFVP PYDGTAVAKL KEQGAVIVGK LNQDEFAMGS SNESSYFGPC KNPWDLSCTP GGSSGGSAAA IAARTATATL GTDTGGSIRQ PASHCGCVGL KPTYGRVSRY GVIAYASSLD QVGPLTRDVT DSALLLGAVA GYDPMDSTSV NTPVPDYVAS LAKGVKGIKI GLPKQYFIEG LDPDVKRAMD EAIAMYKSLG ADIREVSLPN TEYAVATYYI IATAEASANL ARYDGVRFGH RAEDARGLAQ MYSKSRAEGF GPEVKRRIML GTYALSSGYY DAYYVKAQKV RTLIQQDFLN AFKEVDVLLT PIAPTPAFKI AEKLEDPLQM YLSDIFTIPV NLAGTCGISV PAGFSAAGLP IGLQLVGKPF GEQEILTAAY SFERETQWHL KKAPL
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