| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3633 |
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| Symbol | alaS |
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| ID | 6780497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4154577 |
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| End bp | 4157204 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642769628 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002140421 |
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| Protein GI | 197119994 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.511669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGCA AAGAGATCCG GGCTCAGTTC TTCAACTTCT TTCAGAAAAA AGGGCATGCC
CTTGTGGAGA GCTCGAACCT CATCCCACGC AACGACCCTA CCCTCCTCTT CACCAACGCC
GGCATGAACC AGTTCAAGGA CGTCTTCCTC GGCATGGAGA AAAGGGATTA CCTGAGGGCG
GTCTCCTCCC AGAAATGCGT GCGCGCCGGC GGCAAGCACA ACGACCTCGA GAACGTGGGT
CGCACCGCCA GGCATCACAC CTTTTTCGAG ATGCTGGGGA ATTTCTCCTT CGGCGACTAT
TTCAAGAAGG AGGCGATCGG CTTTGCCTGG GAATTCCTGA CCAAGGAACT CGGCCTCTCC
AAGGACCGCC TCTACGTCAC CGTCTACACC GACGACGACG AAGCGGCCGA CATCTGGCAC
AACCAGGAAG GGGTGCCGCG CGAGCGCATC TACCGCTTCG GCGAGAAGGA CAACTTCTGG
TCCATGGGCG ACACCGGCCC CTGCGGCCCC TGCACCGAGA TCTTCTGGGA CAACGGCCCG
GGAACCGGCT GCGGCAGCCC CGACTGCGCG GTAGGATGCG ATTGCGACCG CTACATGGAG
ATCTGGAACA ACGTCTTCAT GCAGTTCAAC CGCGGCAAGG ACGGCGTCCT GACCCCGCTC
CCGAAACCTT CCGTCGACAC CGGCATGGGC CTTGAGCGCA TCTCGGCCGT CATGCAGGGG
GTCACCTCCA ACTACGACAC GGACCTCCTG CAGGGGATCA TCCGCCACAT CGAGCAGGTC
TCCGGGAAGA AGTACCGGGA CGACGAGAAG GATGACGTCT CCATGCGCGT CATCGCCGAC
CACGCCCGCG CCGTCACCTT CCTGATCTGC GACGGCGTCC TCCCCAGCAA CGAGGGGCGC
GGCTACGTGC TCAGGCGCAT CATGCGCCGC GCCGCCCGCC ACGCGAAGAT GCTGGGAATC
GCCGAGCCGG TCCTCTTCCG CATCGTCGAC GCGGTGAACA TGATGATGGG CGACGCCTAC
CCGGAGCTTC TGGAGCGCGA GCATTACGTA AAGAAGGTGA TCCTGGCCGA GGAGGAGCGC
TTCATCGAGA CCCTCGACCG CGGCCTCGCC ATCTTGAACG AGGAGACGGC GGCGCTCAAG
GCCAAGGGAG AGAAGGTCAT CTCCGGCGAG GTCATCTTCA AGCTCTACGA CACCTTCGGC
TTCCCGGTCG ACTTGACCGC CGACATCGTC GAGTCCGAAG GATTCACCCT CGACGAGGAC
GGCTTCGCCC TCTGCATGGA GAAGCAGCGC GTCAAAGCGA GGGAGAACTG GAAGGGGTCC
GGCGAGCAGG GGCTGGCCGA CATCTACAAG GAGCTGCACG GCACCGGCAT CACCACCGAC
TTCCTGGGCT ACAGCGAGCA GACCGCCTTC TCCACCATCA GCGCCATCGT CAAGGGTGGG
ACCCTGGTCG AAGAGGCGAG CGCCGGCGAC GAGATCGAGA TCGTCACCGC GGCGACCCCG
TTCTACGGCG AGTCCGGCGG GCAGGCCGGC GACACCGGAA CCATCTCCAC CGGCTCCGGC
CACATCGAAG TGACCGGCTC CACCCGCCCC TTCACCGACC TCATCGTGCA CCGCGGCCGC
GTGGTCTCCG GCGCCGTCAG GACCGGCGAA GCGGCAGACC TGAAGATCAC CGTCGCCAAC
CGCGCCGCAA CGGCCAGAAA CCACACGGCG ACCCACCTCT TGCAGGCGGC GCTCCGGGAG
GTGCTGGGCG ATCACGTGAA GCAGGCAGGC TCCCTGGTGA CCCCGGACCG GCTCCGCTTC
GACTTCACCC ACTTCACCCC GATGACCCAG GAGGAGATCC GCAGGGTCGA GATCCTGGTG
AACGGCCACA TCATGGGGAA CTCCACGGTT GAGTCCCGCG AGATGCCGGC GGCAGACGCG
CTTGCCGCAG GCGCCACAGC GCTCTTCGGC GAGAAGTACG GCGACGTGGT CCGCGTGGTC
AAGGTGGGAG ACGTCTCCAG CGAACTCTGC GGCGGCACCC ACGTCCACGG CGCCGGCGAG
ATCGGCTTCT TCAAGATCAT CTCCGAGGCG GGGATCGCCG CGGGGGTCCG GAGGATCGAG
GCGCAGACCG GCAGCGGCGC GCTGGCGGTG GTGCACGGAA TGGAAGACGA GCAGCGCGGC
ATCGCCACCC TTCTGAAGGC TGAAGGGGGA ACCGTCCTGG ACAAGGTCGA GAAACTGGTG
GCCGGCCAGC GCGAGCTGCA AAAGGAGCTC GAAACGCTGC AGGCGCGTCT GAACGCCTCC
AAGTCCGCAG ACCTGATCCA GCAGGTGCGC GAGCAAAACG GCATCAAGAT CCTGTCGGTA
AAGGTCGACG GGGACGCTAA GGGGTTGAGG GAACTCTCCG ACACGCTGAA GCAGCGCATC
GGCTCCGGCA TCATCGTCCT TGGGACCAGC GACGCCGCGA GGGCGAACCT CCTGGTGGCG
GTGACGGCCG ATCTCTCGGC GCGCTGGAAG GCGGGGGACA TCATCAAGGC CATCGCCCCG
ATAGTCGGGG GCAACGGCGG AGGAAAGCCC GAGCTGGCGC AGGCGGGAGG CTCCAAGCCG
GAACACCTGG CCGAGGCGCT AGAGGCGGTG TACCAGATAG TGGGGTAA
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| Protein sequence | MTGKEIRAQF FNFFQKKGHA LVESSNLIPR NDPTLLFTNA GMNQFKDVFL GMEKRDYLRA
VSSQKCVRAG GKHNDLENVG RTARHHTFFE MLGNFSFGDY FKKEAIGFAW EFLTKELGLS
KDRLYVTVYT DDDEAADIWH NQEGVPRERI YRFGEKDNFW SMGDTGPCGP CTEIFWDNGP
GTGCGSPDCA VGCDCDRYME IWNNVFMQFN RGKDGVLTPL PKPSVDTGMG LERISAVMQG
VTSNYDTDLL QGIIRHIEQV SGKKYRDDEK DDVSMRVIAD HARAVTFLIC DGVLPSNEGR
GYVLRRIMRR AARHAKMLGI AEPVLFRIVD AVNMMMGDAY PELLEREHYV KKVILAEEER
FIETLDRGLA ILNEETAALK AKGEKVISGE VIFKLYDTFG FPVDLTADIV ESEGFTLDED
GFALCMEKQR VKARENWKGS GEQGLADIYK ELHGTGITTD FLGYSEQTAF STISAIVKGG
TLVEEASAGD EIEIVTAATP FYGESGGQAG DTGTISTGSG HIEVTGSTRP FTDLIVHRGR
VVSGAVRTGE AADLKITVAN RAATARNHTA THLLQAALRE VLGDHVKQAG SLVTPDRLRF
DFTHFTPMTQ EEIRRVEILV NGHIMGNSTV ESREMPAADA LAAGATALFG EKYGDVVRVV
KVGDVSSELC GGTHVHGAGE IGFFKIISEA GIAAGVRRIE AQTGSGALAV VHGMEDEQRG
IATLLKAEGG TVLDKVEKLV AGQRELQKEL ETLQARLNAS KSADLIQQVR EQNGIKILSV
KVDGDAKGLR ELSDTLKQRI GSGIIVLGTS DAARANLLVA VTADLSARWK AGDIIKAIAP
IVGGNGGGKP ELAQAGGSKP EHLAEALEAV YQIVG
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