Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3622 |
Symbol | |
ID | 6780486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4143273 |
End bp | 4144040 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642769617 |
Product | ABC transporter related protein |
Protein accession | YP_002140410 |
Protein GI | 197119983 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAACG GTAAAGGGAT TCCCGCCATC GAGGTGCGCC ACCTGACCGT CTCTTACGGC GCGCGCCCAG CGCTTCTCGA CGTGTCGGTC AGGATCGAAA AGGATCAACT GGTAGGTGTG ATCGGCCCCA ACGGATCGGG GAAGTCCACG CTGATCAAGG CCATACTCGG TTTCGAGAAG CCGGACGTGG GGGAGATCCT CATCGGCGGC GAGGATGTGC AGAAGGCCAA GGGGAAGGTG GCCTACGTCC CGCAGCGCGG CGCCGTGGAC TGGGATTTCC CCATCACCGT CCGGGAGGTG GCGCTCATGG GGCGCTACCA GCACGTCCCC TGGTACCGCT CCCCTTCCGC GGCGGACCGC GAGGCGGCAC TGGAGGCGCT CTCCATGGTC CGCATGTCGG ACTTCGCCGA GCGCCAGATA GGGCAGCTCT CGGGCGGGCA GCAGCAGCGG GTGTTCCTGG CGCGGGCGCT GGCGCAGGGT TCCGACATCC TGCTCCTGGA CGAGCCTTTC GCCGGGGTGG ACGCTGCCAC CGAGCGGGCC ATACTCGACG TCCTGGAACG GGCCAAGGCG GCCGGGAAGA CCCTGGTCGT GGTGCACCAC GATCTCGCCA CCGCGGCCGA GTACTTCGAC AACCTGGTTC TCTTGAAGCA GCGGCTCTAC GCCTTCGGAC CTCCCGCCGC CGTGTTGCAG GAGGAACTCT TGAGCCAGGT CTACGAGGGG CGCCTCAGGG TCTTCACCGA CCTGATGGCC AAGGAGGGGG GGCGATGA
|
Protein sequence | MNNGKGIPAI EVRHLTVSYG ARPALLDVSV RIEKDQLVGV IGPNGSGKST LIKAILGFEK PDVGEILIGG EDVQKAKGKV AYVPQRGAVD WDFPITVREV ALMGRYQHVP WYRSPSAADR EAALEALSMV RMSDFAERQI GQLSGGQQQR VFLARALAQG SDILLLDEPF AGVDAATERA ILDVLERAKA AGKTLVVVHH DLATAAEYFD NLVLLKQRLY AFGPPAAVLQ EELLSQVYEG RLRVFTDLMA KEGGR
|
| |