Gene Gbem_3617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3617 
Symbol 
ID6780481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4136418 
End bp4138955 
Gene Length2538 bp 
Protein Length845 aa 
Translation table11 
GC content63% 
IMG OID642769612 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002140405 
Protein GI197119978 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGG GTGACGCCAA CCAAAGAAGA GTCGAGACGG CGAGGATCGT CGGCATCTAC 
GCCATCTTCG GCCTGGCCTG GATCTACGGG TCCGACCACG TCCTGGACTG GATGTTCGAA
GACCGCGCCC TGCTGCTCCG GATCGCCGTC GCCAAAGGCT TCCTCTTCAT ACTCTGCACC
GCTGCGCTGC TCTATTTCCT GATCAGCCGC TATCTCGACA GGCTCGGCGC CGCCGAGCGC
GAAAGGCTCG AGATCCTGGA CAACTACCGG ACCATCTTCA ACGCCACCAA CGAAGCCATC
TTCCTCCACG ACATCGACAG CGGCCGCATC CTCGACGTGA ACCAGCAGGT ACTGGAGATG
TACGGCTATA CGCGGGAAGA GGCGCTAGCC GGCGACATCG GCCTGTTTTC CGCGGGGAGC
GCCCCCTATT CCCAGTCCGA GGCGGTCGCC AAGGTGCGCA AGGCGGCCGA TGAGGGGCCG
CAGGTATTCC AATGGCTCGC CAAAAGGAAA AACGGCGAGC AGTTCTGGGC CGAGGTGTCG
CTCAGGAGGA CTACTGCCCG GGGGAAGCTC GCCATCATCG CCGTGGTCAG GGACGTGACC
GAACGCAAGA GGCAGGAGGA CGCCCTCAAG GAGAAAAACG CCCACCTGCG TTTCTTCTTC
GAGTACGCGC CGGCCTCCCT GGCCATGTTC GACCGCAAGA TGCGCTATAT GCAGGTGAGC
CGCCGCTGGC AGAGCATGTA CGGGCTGGGC GACCGCAACC TGATCGGGCT GTCGCACTAC
GACGTCTTCC CCGAGATTAC CGAGCGCTGG AAGGAGTTGC ACCGGCGTGG CCTTGCGGGG
GAGGTCCTCG GGGAGGAGGC GGACCGGTTC GTGCGCGCCG ACGGCACCGT GCAGTGGGTG
CGCTGGGAAA TCCGCCCCTG GTACGAGGCG GTGGACCGAG TCGGGGGGAT CGTCATCTTC
ACCGAGGACA TCACCCAGAG AAAATTGACC GAGGAGGCGC TCTCCGCCAA CGAGCGCTTC
CTGCGGATGC TCACCGACCA GCTCCCCGGC ATGGTGGCCT ACTGGGACAA CGACCTGCGC
TGCAGCTTCG CCAACAAGGC CTACCAGGAG TGGTTCGGCA AAAGCCCAGA GCAGATGATC
GGGATCACCC TGCCGGAACT GCTGGGGGAA AAACTCTTCG CGGAAAACGA GCAGTACGTC
CGGAAAGCCC TGGCGGGCGA GCCGCAGCAC TTCGAAAGGA CCCTGGTGAA GCCGGGGGGA
GAGAAGGGCT ACACCTGGGC GCATTACATC CCGGACAAGA TAGGGGGCGT TACCAGGGGG
TTCTATGTCC TCGTCTCCGA CGTGACGGAA CTGAAGCTCG CCGAGGCGGA GAAGGTCCGG
CTGGAATCCC AGCTGCAGCA GGCGCAAAAG CTGGAATCGG TGGGACGTCT GGCAGGCGGC
GTGGCGCACG ATTTCAACAA CCTTCTCACC GTGATACTGG GGCTGGCGCA ACTGGGGATG
GGGGAACTCG ACCCCGGCGA CCCGGTCCGC GGCCGGCTCG AAGGGATCAG GCAGGCGGCC
GAGAAGTCCG CCGCGCTGAC GCAACAGCTG CTTGGTTTCG CCAGGAAGCA GACCATCGCC
CCCGTAATGC TGGACCTGAA CCAGACGGTG GAGCAGATGC TGAGCATGCT GAAACGGCTG
GTGGGCGAAA ATATCGAGGT GGTGTGGCGC CCGGCGCGGG AGCTTTGGCG GGTCAAGATG
GACCCGACCC AGTTGGATCA GATCCTCGCC AACCTCTGCG TCAACGCCCG CGACGCCATT
GACGATGTCG GCAGGATCAT CATAGAGACT GGAAACGCAA GGCTCGACCA GGAATACTGC
GCCGCCCGCT TCGGGTTCGT TCCCGGCGAG TACGTGCAGT TGACGGTGAG CGACGACGGC
TGCGGCATGG ATAAGGAGAT GATGGCGCAC ATCTTCGAGC CTTTCTTCAC CACGAAAAAG
CTGGGGAAGG GAACGGGGCT AGGTCTCGCC ACCCTGTACG GCATCGTCAA GCAGAACAAC
GGCTTCATAA ACACCTACAG CGAGCCCTGC GCGGGAACCA CCTTCAAGAT CTACCTTCCC
CGCCACGATG CGGCAAAGGC CGAGACGTTG CCGGAGCCTG CGGAGCAGCC GGTTTCCCGC
GGCCACGAGA CTATCCTGCT GGTGGAGGAC GAGCCTAGCA TCCGGGAGGT GACGATTTCC
CTGTTGCAGC TGCAGGGGTA CCGGGTGCTG GCAGCGGGAC TCCCCCGCGA GGCCCTGGAA
CTCGCCCGCG CCCACGCAGA CGAGATCGAC CTGGTGATGA CCGACGTGGT GATGCCCGAG
ATGAACGGCA GGGAACTGGC GCGCAGCCTC CTCGCCATCT CTCCCCGACT GAAGGTCCTG
TTCATGTCGG GATACACGGC CAACGTCATC GCCCACCACG GCGTGCTCGA GGAAGGGGTC
AACTTCATCT CGAAGCCGTT TTCGCTGCCG GACCTGGCGG AAAAGGTGCG CGAGGTGCTG
GACGCGAAGA CGCCGTGA
 
Protein sequence
MKQGDANQRR VETARIVGIY AIFGLAWIYG SDHVLDWMFE DRALLLRIAV AKGFLFILCT 
AALLYFLISR YLDRLGAAER ERLEILDNYR TIFNATNEAI FLHDIDSGRI LDVNQQVLEM
YGYTREEALA GDIGLFSAGS APYSQSEAVA KVRKAADEGP QVFQWLAKRK NGEQFWAEVS
LRRTTARGKL AIIAVVRDVT ERKRQEDALK EKNAHLRFFF EYAPASLAMF DRKMRYMQVS
RRWQSMYGLG DRNLIGLSHY DVFPEITERW KELHRRGLAG EVLGEEADRF VRADGTVQWV
RWEIRPWYEA VDRVGGIVIF TEDITQRKLT EEALSANERF LRMLTDQLPG MVAYWDNDLR
CSFANKAYQE WFGKSPEQMI GITLPELLGE KLFAENEQYV RKALAGEPQH FERTLVKPGG
EKGYTWAHYI PDKIGGVTRG FYVLVSDVTE LKLAEAEKVR LESQLQQAQK LESVGRLAGG
VAHDFNNLLT VILGLAQLGM GELDPGDPVR GRLEGIRQAA EKSAALTQQL LGFARKQTIA
PVMLDLNQTV EQMLSMLKRL VGENIEVVWR PARELWRVKM DPTQLDQILA NLCVNARDAI
DDVGRIIIET GNARLDQEYC AARFGFVPGE YVQLTVSDDG CGMDKEMMAH IFEPFFTTKK
LGKGTGLGLA TLYGIVKQNN GFINTYSEPC AGTTFKIYLP RHDAAKAETL PEPAEQPVSR
GHETILLVED EPSIREVTIS LLQLQGYRVL AAGLPREALE LARAHADEID LVMTDVVMPE
MNGRELARSL LAISPRLKVL FMSGYTANVI AHHGVLEEGV NFISKPFSLP DLAEKVREVL
DAKTP