Gene Gbem_3589 details

Gene Information

• Locus tag: Gbem_3589
• ID: 6780453
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 4105029
• End bp: 4105715
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642769584
• Product: ABC transporter related protein
• Protein accession: YP_002140377
• Protein GI: 197119950
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCTCCG TTCAGAACGT AGTGAAGATC TTCAACGGCG GGCGACCGAA CGAGTTGCGC 
GCGGTCCGGG AGGTTTCCCT GGAGATCGGG TTGGACCAGG CCACGGCCCT GGTGGGACCG 
AGCGGATCGG GAAAGACGAC GCTCCTCTCT TTGATTGGAT GCATGGCCCG CCCCACATCC 
GGCCGCATCT TCGTCAAGGA AGAGGAGGTC ACCAGCCTCC CTGAGCGGTT TCTTGCCGGG 
ATCCGAAGAT CGACCTTCGG GTTCGTCTTT CAGCGGCACA ATCTGATAAA GGGAATTTCC 
GTGCTGGAGA ACGTCATGGC GCCCGCTTAC CCCGAGGGGG AACCTTTCCC GCAGCTTCGG 
CAAAGGGCCC TCGATACCTT GGAGCGGTTG AACCTGAAGC AGCGTGCGGA CGCTAAGGTG 
GAGTGGCTTT CCGGAGGGGA GGCGCAGAGG GTGGCAATCG CTCGCGCCAT GATTAACCGT 
CCAGCCGTCA TGATAGCCGA TGAGCCGACG GCGCACCTCG ATACGAAGTT GTCCTACGAC 
TTCATGTCGC TTATGAAGGA AGTGAAAGAC GCCGGGACCG CGGTTATCCT TGCCAGCCAC 
GACCCCATCG TCTATGGCTG CGACCTTATC GGCCGGGTAG TGGAGTTGCG TGACGGGCGG 
GTAGTGACCG AGAGGAACCC GAGGTGA 

 

Protein sequence

MISVQNVVKI FNGGRPNELR AVREVSLEIG LDQATALVGP SGSGKTTLLS LIGCMARPTS 
GRIFVKEEEV TSLPERFLAG IRRSTFGFVF QRHNLIKGIS VLENVMAPAY PEGEPFPQLR 
QRALDTLERL NLKQRADAKV EWLSGGEAQR VAIARAMINR PAVMIADEPT AHLDTKLSYD 
FMSLMKEVKD AGTAVILASH DPIVYGCDLI GRVVELRDGR VVTERNPR