| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3581 |
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| Symbol | |
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| ID | 6780445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4098881 |
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| End bp | 4100368 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642769576 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_002140369 |
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| Protein GI | 197119942 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGGGGG ACGTTAAAGT TATGTCGTAT CTTCGCAAGG CCCTAGGGGC TGTGCTTTCA
TTACTGATTA TCTCGACGGG TTCGCCTGCC GCGACCTTTG CCGGACAAGC TGCTCCCCCT
GCACGGACCG AACTCGGCGT TGCCAGCAAT TCCGCGGCCC GGCTTAAAAA TGATATCGAC
GCCATCCTCG CTCGTGAATT TCTTCCCGTC ACCAGCGCGG GAATAAAGGT GGTCTCGCTG
AAGCACGGCG ACACCATCTA CGAGTTCAAC CCGCGGCTTC TCTTGGTTCC CGCCTCCACT
CAAAAGGTCT TCACCGCGGT TGCTGCCTTG TCCATCCTGG GACCGGACCG GGAGGTCGCC
ACCACTGTTG CGCTTGACGC AGCGGGGGCG AGGATCTACC TGAAAGGATG CGGTGACAGT
CTGCTCTCCG CGGCGGACTT GGCGACCCTG GCCGCGGCTG CGGCTTCCAA GCTGGACAAG
GGGAGGGAGT ACACTCTCGC CGCCGATCTT TCTTGTTTCG ACGACCTCTA CCGTGGCATG
GGGTGGATGT GGGACGACGA CGAGATGATG ATCTCTCCAT TGTCGGTCAA CCACAATGCC
GTCTCACTCC TGGTGAAGCC TGGCGCCAAG GCGGGCGCCC CGGCCGTTGT CACGGCGGAA
CCTCGCACCT CCTACTACAC CGTTCAAAAT CTGACTAGGA CCGGTAGTGC CAAGGATGAA
AGCAGCATCC AGGCCTCAAG GCGCCCCGGC GAGCGGGACA ATGTGGTCAC GGTGACCGGA
GTGATAGCGT TGGGAAGTGC TCCCCAGGTG AAACAGGCCA GCGTCTGGCG GCCGGAACTG
ATGGCGCTCA CCCTGTTCCG GGATGCGCTC CGGGCGCAAG GGGTGAAGGT CACGGATATG
ACTACGGCTA CCACTCCGGC GGGAGCAACC GAGGTGGCGC GCTCCTCCCA TAGCCTGGAG
GAGATGGTTC GATTCGCATT GAAGACCAGC GACAACGTGA CAGCCGAGAG CCTGTTGAAA
CTGCTGGGTC TGCATGGAAG CGGAAAGCGG GGATCGGCGG AGGCGGGGAG TGCCGTGGTG
CGCCGTTACC TGGAGAGGCA GGGGATAGCC ACTGATAACG TGGTGGTCGC AGACGGTTCC
GGCCTTTCGC GCTACAACCT TTCCAGCGCT GACACCATGA TTCAGGTGTT GCGCGCCATT
CAGCGCGACC CGGGGCTGTA CCGGATCTTT CAGGAATCCC TTCCAATAGC AGGTATAGAT
GGCACGTTGA AGAACCGCAT GAAGGGGAGC TGCGCCGAAG GAAACGTGCG GGGGAAAACA
GGAAACATGA AAGGCGTCTC CGCTCTAGCC GGGTACGCCA CCAGCGCCGA CGGGGAACCG
TTTGCCTTTT CCATCATCAT CCAGAACTAC CCCCGTTCCG GGCGGCAGGC CCGGGAGGTC
CAGGATCGCA TCGCGAAACT TCTCTGCGGC TTCCGCCGCA CCCCCTAA
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| Protein sequence | MKGDVKVMSY LRKALGAVLS LLIISTGSPA ATFAGQAAPP ARTELGVASN SAARLKNDID
AILAREFLPV TSAGIKVVSL KHGDTIYEFN PRLLLVPAST QKVFTAVAAL SILGPDREVA
TTVALDAAGA RIYLKGCGDS LLSAADLATL AAAAASKLDK GREYTLAADL SCFDDLYRGM
GWMWDDDEMM ISPLSVNHNA VSLLVKPGAK AGAPAVVTAE PRTSYYTVQN LTRTGSAKDE
SSIQASRRPG ERDNVVTVTG VIALGSAPQV KQASVWRPEL MALTLFRDAL RAQGVKVTDM
TTATTPAGAT EVARSSHSLE EMVRFALKTS DNVTAESLLK LLGLHGSGKR GSAEAGSAVV
RRYLERQGIA TDNVVVADGS GLSRYNLSSA DTMIQVLRAI QRDPGLYRIF QESLPIAGID
GTLKNRMKGS CAEGNVRGKT GNMKGVSALA GYATSADGEP FAFSIIIQNY PRSGRQAREV
QDRIAKLLCG FRRTP
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