| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3577 |
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| Symbol | |
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| ID | 6780441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4092206 |
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| End bp | 4093858 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642769572 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_002140365 |
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| Protein GI | 197119938 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACAC CTGCCACTGC AGCAAAGACG AGGAAGGCGG AGTATTGCCG CTGCGGTGTA
ATCTTTTGCG ATGAAGCCGG CCGCATTACC GCCGCCAGCA AGGATTACAT CTGGCCAGCC
GGCATGAAGG CAAAGGCGGG GGAGGATCTT CCCGCCGAGC TGCTCCTACT TCATGCGGGG
GAATGGGTCT TTCTGGAGAA AGATTGGTTC GTGCAGGCGG AGGGAAAGGG ACGGGTGGAG
ATGCTGCTCT TCCGCAGGAT CAGGGCCGCG GACCAGGTCC TTGGGCCCTA CGGCGACTCT
GCGATTAACG AGGGGATGGT CCACATGGTT CTGAATAACC CGTACGAGGG TTTGACCTCC
GTGGACCGGG AGGGCAAGGT CACCTTCCTG AGCCCGGTGA ACGAAAAGTG GCTGGGGCTG
GAAGAGGGAG GAGGGATGGG GCTGCCGCTC TCTTCGTTCG CTCCTGGAAG CCGGCTTGCC
GAGATCGCCC TTACCGGGGT CTCCGACACC ACCCAAGTGG TCGATATTCA AGGGCAGACC
AAGGTGACGG TCAACCTCCC CATCAAGAAA GGGCAGAAGG TGATCGGGGC GGTAGGGCGC
ATACTGTTCA AAAGTACCGA CCAGATCGAC AAGCTGGCCA ACCGTATCCG CACCATGGAA
CTGAAGGTCG AACGGTACGA GACCCTGCTC GACGAGATGC GGGGCAACCG CTACAACTTC
GACAAGATCC TCACCAACAA CAAGCCCATG CGGGCCCTGA TCGACCAGGC ACGCCGGGTC
GCCGACTCCT CGGCGACGGT ACTGATCCTC GGGGAGAGCG GTACGGGCAA GGAGCTTTTC
GCACAGGCCC TGCACGAGGG ATCGGCCCGC AGGAGAGGGC CCTTCGTGGC GATCAACTGC
AGCGCCCTCC CTCACGACCT TATCGAATCC GAACTGTTCG GTTATGATGA GGGTGCCTTC
AGCGGGGCGA AACGGAAGGG GAAGCCGGGA AAATTCGAGT TGGCCTGCGG GGGGACGCTC
TTTCTCGACG AGATCGGCGA GCTGCCACTG GAGAGCCAGG CGAAACTTCT CCGCGTTCTG
GAAGAACGCA AGATCGACCG GCTTGGCAGC ACCTCGCCCA TCTCAGTAGA TTTCCGTCTG
TTGGCCGCAA CAAACCGCAA CCTGGAAAGC TCGGTGAACA CAGGGAAGTT CCGCAGCGAC
CTCTTCTACC GCATCAACGA ATTTCCCATC GAGCTTCCCC CGTTGCGGTC GCGCCGGGAT
GACATCCCCC TCCTGAGCAA GCACTTTCTT GAGGAGATCA CCCACAAGGA AAAGCTTCCC
ATGCTGACCA TCTCCGAGGA GGCGAAAGCC GCCCTGATGC GCTACGACTG GCCAGGGAAC
GTGAGGGAGT TGCGGGGGCT GATGAGGCAA ATGACCTGGA AAACCCAGGG ACATACCATC
GAGCTCCACC ACCTGCCTGC CGCGTTCACC GAAGAAGGAA CGATCATCGG GGCCTCCGGC
TCCCTAGAGG AACAGCTGGC GAGCGCCGAG CGGGCCATCA TCGAAACAGC TCTCGAAACC
GCCCAGGGGA ACCGTGCCCT CACGGCCAGG ATGCTCGGCA TCCACCGCAC CGCGCTGTAC
AAGAAGATGA CCAGACTCGG CATGGAGATG TGA
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| Protein sequence | MDTPATAAKT RKAEYCRCGV IFCDEAGRIT AASKDYIWPA GMKAKAGEDL PAELLLLHAG
EWVFLEKDWF VQAEGKGRVE MLLFRRIRAA DQVLGPYGDS AINEGMVHMV LNNPYEGLTS
VDREGKVTFL SPVNEKWLGL EEGGGMGLPL SSFAPGSRLA EIALTGVSDT TQVVDIQGQT
KVTVNLPIKK GQKVIGAVGR ILFKSTDQID KLANRIRTME LKVERYETLL DEMRGNRYNF
DKILTNNKPM RALIDQARRV ADSSATVLIL GESGTGKELF AQALHEGSAR RRGPFVAINC
SALPHDLIES ELFGYDEGAF SGAKRKGKPG KFELACGGTL FLDEIGELPL ESQAKLLRVL
EERKIDRLGS TSPISVDFRL LAATNRNLES SVNTGKFRSD LFYRINEFPI ELPPLRSRRD
DIPLLSKHFL EEITHKEKLP MLTISEEAKA ALMRYDWPGN VRELRGLMRQ MTWKTQGHTI
ELHHLPAAFT EEGTIIGASG SLEEQLASAE RAIIETALET AQGNRALTAR MLGIHRTALY
KKMTRLGMEM
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