Gene Gbem_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3563 
Symbol 
ID6780426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4076204 
End bp4076704 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content59% 
IMG OID642769557 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_002140351 
Protein GI197119924 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGAG ACGATCACTA CTGGATGGGC AAGGCAATAG CGCAGGCAAG AAGGGCCGAA 
GCGATAGGCG AAGTACCGAT AGGCGCCGTC ATAGTCAAGG ATGGGGTCAT CATCGCACGG
GGGCACAACC TCAGGGAGAG CAACCAGGAC CCCGCGGCGC ATGCCGAGAT GATCGCCATC
CGCAAGGCGG CGAAGAAGCT GGCCAGTTGG CGCCTGACCG GCGCGACCCT GTACGTGACC
CTTGAGCCCT GCACCATGTG CATGGGAGCC GTCATCCTCT CCCGCCTGGA CCGCGTCGTT
TTCGGGAGTT ACGATCCAAA GGGAGGAGCC GCCGGATCTC TCTACGACCT TTCCGACGAC
AAGAGGCTGA ACCACAGCGT CGTACTCACC CCCGGGGTCA GGGGCGAAGA AACATCCTCC
ATGCTGTCCG GGTTTTTCGC CGAACTGAGG GCGAAGAAAA AGAGCGTGAA TAAATCCTCA
CCCACTTCCG AAAATAGTTA A
 
Protein sequence
MQRDDHYWMG KAIAQARRAE AIGEVPIGAV IVKDGVIIAR GHNLRESNQD PAAHAEMIAI 
RKAAKKLASW RLTGATLYVT LEPCTMCMGA VILSRLDRVV FGSYDPKGGA AGSLYDLSDD
KRLNHSVVLT PGVRGEETSS MLSGFFAELR AKKKSVNKSS PTSENS