Gene Gbem_3562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3562 
Symbol 
ID6780425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp4075651 
End bp4076070 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content59% 
IMG OID642769556 
Productnickel responsive regulator 
Protein accessionYP_002140350 
Protein GI197119923 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGAGA CAGTAAGGTT TGGTATATCA ATGGACGACC AATTGCTTGA GAGTTTCGAC 
AGGCTCATTG AGCAGAAAGG TTACGCCAAT CGCTCCGAGG CGATCCGCGA CCTGATCCGG 
GCGGCCCAGG TAGAGCTCGA CTGGGAAGAA GGGGAAAAAG AAGGCGTCGG CACCGTCACC 
CTCGTCTACA ACCACCACGT CCGCGATCTT TCCGACAAGC TCACCGAGCA CCAGCACGCG 
CATCACGACC AGATCATCTC CGCACTGCAC GTCCATCTCG ACGCCCACAA CTGCCTCGAA 
GTGCTCGTGG TGCGTGGCAA GGCCCGCGAC GTGCGCAGGA TTGCCGACGA ACTGATCGGG 
GTCAAGGGAG TGAAGCACGG CAAACTGGTC ATGACCACCA CCGGCGAAGG CCTGCACTGA
 
Protein sequence
MGETVRFGIS MDDQLLESFD RLIEQKGYAN RSEAIRDLIR AAQVELDWEE GEKEGVGTVT 
LVYNHHVRDL SDKLTEHQHA HHDQIISALH VHLDAHNCLE VLVVRGKARD VRRIADELIG 
VKGVKHGKLV MTTTGEGLH