Gene Gbem_3543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3543 
Symbol 
ID6780406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp4057673 
End bp4058890 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content61% 
IMG OID642769538 
Productprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 
Protein accessionYP_002140332 
Protein GI197119905 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2241] Precorrin-6B methylase 1
[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR01444] methyltransferase, FkbM family
[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACAAC AAAAGATCTA TCTTGTCGGC GCGGGAATCG AGGGATGGGA AGGTTTCGGG 
AAGCAGGCGC TCGAAGTGAT CGAAGGCGCC CAGGTCCTGA TCGGGCACAA GCGGCTTTTG 
GACATCTTCC CCGAATTCAA AGGTGAGAAG CGCCTCCTGG ACGACCTTTC CATCACGCTC 
GAATACCTGA AGACCACCGA CAAGAGGGCC GTAGTCTTAG GTTCCGGCGA CCCCAACTTC 
TTCGGGATCG CACGTTTCCT GTTGCGCAAC CTCCCCAAGG ACCGGGTCGA GATCTATCCC 
AACGTCACCA GCGTCCAGTA TGCCTTTGCA CGCATCAAGG AACCCTGGGA TGACGCCACC 
TTCGTCTCGG TGCACGGCCG CGGCATCAAG CCGGCGCTGG ACCGCATCAT CGCCTCCGAA 
AAAATCGCCA TCCTCACCGA CAGCGTCAAC ACCCCGGCGG TCCTTGCCCG CGAGTTGATC 
GCACGCGGCG CCGAAGGGTA CGAGGCCTGG GTCTGCGAGG ACCTGGGGCT TGCCTCCGAG 
AAGTTCACCA AGACCGACGT GAAGGGGCTC GCCGAGCTGA CCTGCTCGCC GCTCAACATC 
CTGATCCTGA TCAAGACCTG GGAACCGAAC CTGCAGAACT ACCCGATGAT CGGCATCCGC 
GACGACGAGT TCGCCACCGC GAAGAAGCTG ATCACCAAGG AGGAGGTCCG GGCCATTACG 
CTTGGCAAGT TGCAGTTGCA GGACGACCTG GTGATGTGGG ACATCGGCGC CGGCAGCGGC 
TCCGTCTCCA TCGAGGCGGC CAACCTGATG CCCAACGGGC GCATCTTCGC GCTGGAGAAA 
AACCCGCAGT ACCTGGTCTT CTTGAAGGAG AACCTGAAGA AGTTCGCAGC GCGCAACGTG 
ATGGTGGTCG AGGCCTTCGC GCCCGACGGG CTGGAGGAGC TTCCGGACGC GGACCGCGTC 
TTCATAGGGG GCTCCAGCGG CATGCTGGAG GAGATCATCG ACGCGGTCGA CAAGCGCCTG 
AAGCCGGACG GCTTCATCGT CATCAACGCG GTGACGCTCG ATACGCTGAC CAAGTCGGTG 
GAGTTTTTGG AGGACCACGG CTATACGGTC GAGGTAACCT GCGTCAACAT CTCCAAGACC 
CGCAACCTCA CCGAGTACAA GATGTTCGCC GCCCACAACC CGGTCTACGT GATCGCAGCC 
TGGAAAGGGG AGGAGTAG
 
Protein sequence
MPQQKIYLVG AGIEGWEGFG KQALEVIEGA QVLIGHKRLL DIFPEFKGEK RLLDDLSITL 
EYLKTTDKRA VVLGSGDPNF FGIARFLLRN LPKDRVEIYP NVTSVQYAFA RIKEPWDDAT 
FVSVHGRGIK PALDRIIASE KIAILTDSVN TPAVLARELI ARGAEGYEAW VCEDLGLASE 
KFTKTDVKGL AELTCSPLNI LILIKTWEPN LQNYPMIGIR DDEFATAKKL ITKEEVRAIT 
LGKLQLQDDL VMWDIGAGSG SVSIEAANLM PNGRIFALEK NPQYLVFLKE NLKKFAARNV 
MVVEAFAPDG LEELPDADRV FIGGSSGMLE EIIDAVDKRL KPDGFIVINA VTLDTLTKSV 
EFLEDHGYTV EVTCVNISKT RNLTEYKMFA AHNPVYVIAA WKGEE