Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3539 |
Symbol | |
ID | 6780402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4052285 |
End bp | 4054615 |
Gene Length | 2331 bp |
Protein Length | 776 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642769534 |
Product | cobyric acid synthase CobQ |
Protein accession | YP_002140328 |
Protein GI | 197119901 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1010] Precorrin-3B methylase [COG1492] Cobyric acid synthase |
TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ [TIGR01466] precorrin-3B C17-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.714834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAGC TTTTTGTAGT GGGAATCGGC CCTGGCGGCC TGAATCATAT GACCTTCGAG GCGCGCGAGG CGGTCGAGAA GGCTGATGTC GTCGTGGGCT ACAAGACGTA CTTGGATTTC ATCGAGCCGC TCCTCTCCGA CAAGGAGGTT GTTTCCTCGG GGATGATGCG GGAGGTGGAA CGCTGCTCGG AGGCGCTCGC CATCGCCGCG ACCGGGAAGA CGGTGGCGCT GGTTTCCAGC GGCGACGCGG GGATCTACGG CATGGCGGGC CTTGCCCTGG AGCTGGCGGA CGCACCCGGC GACGGCGCGC CTTCCCCATA CCCAGGAGTG GAGATTGTGA TCGTCCCCGG TGTTTCCGCG GTGCAGGCTG CGGCGTCGGT CCTGGGCGCT CCGCTCATGC ACGACTTTGC CGTGATCTCG CTCTCGGACC TTTTGACCCC GCTCGATACT ATCCGGCAGA GGCTGCATGC CGCGGCCGCC GCCGACTTCG TGGTCGCCCT CTACAACCCG CGCAGCAAGG GACGGGTCAC CCAGATCGAG GAGGCCCAGG CCATTCTCAT CGCCGCGCGC GGTCCCAAAG TCCCGGTGGG AATCGTCAGG AACGCTTGCC GCGAGGGTGA GGAGCGCATC GTCACCACGC TGGGGGAGAT GCTCACGCAC CCCATCGACA TGTTCTCCAT CGTCATCATC GGCAACGCCT CGACCCGCCT TTCGGACGAC GGCCGCATCG TGACCCCCCG CGGCTACGCG ACCCGCGGCG AGGAAAGGAA AGGGGGGCGG AAGCAGCAGG CTAGCGCTGC AGCACCTGCG CCCAACGCGC AGGCGTTGAT GTTCTGCGGC ACCGGTTCGG ATGTCGGCAA GTCCGTCATC ACCGCCGGGT TCTGCCGCAT CCTGAAACGC CGCGGCGTCT CGGTCGCTCC CTTCAAGTCG CAGAACATGG CGCTCAACTC GGCTGTCACG CCGGAGGGGG GCGAAATCGG CCGTGCCCAG GGGGTGCAGG CGGAGGCTTG CGGCATCGAG CCGCACACGG ACATGAACCC GATCCTCCTG AAGCCGAACT CCGACACCGG GAGCCAGGTG ATCGTGCAGG GTCGGGTGGT GCGCAACATG GGGGTGAAGG AGTACAACGC CTACAAGCCG GAGGCTTTCC TGAAGGTGAA GGAGAGCTTC CAAAGGCTCA AGGAGCGCTT CGACTTCATC GTGATGGAGG GGGCGGGGAG CATCGCGGAG ATTAACCTGC GCGCCCACGA CATCGCCAAC CTCAAGGTGG CCGCCATGGC GGGGGCGCCG GCCATACTCG TGGCCGACAT CGACCGCGGC GGCGTCTTCG CGCAGATCGT CGGCACCCTG GAACTGCTGA CGCCGGAAGA GAAGGCGCTG GTCAAGGGGG TCATCATCAA CAAGTTCCGT GGCGACGCCT CCTTGCTCAC CCCGGGGATA GAGTACGTGG AACAGCGCAC CGGCGTCCCT GTCTTGGGGG TGCTCCCCTG GTTCAAGGGA ATATCGCTTC CGGAGGAGGA CAGCGTCGCC CTGCAAAGGC GCGCAAAGCC AGCGGCGAAG GAGGGGGCGA AGCTCCTTGT CGGCGTGGTC CGCCTCTCCA GGATCGCCAA CTACACCGAC TTCAGCGCGC TGGAGGCCGA GCCGGATGTC GAGCTCCACT ACATCGATTC GCCGCGCCAG ATCGACTCGC TGGACCTGCT GATCCTCCCG GGGACTAAAT CGACGCTGGC GGACCTCGGC CTGCTTAAGG AAAACGGGAT GTTCACCGCC GTGGCCCAGT TCAAGGGGCC GGTGGTGGGG ATCTGCGGCG GGTACCAGAT GCTGGGGAAC ATGGTGCTTG ATCCGGAGCG GGTGGAATCC GCCCATGACA GCGAGGCGGG GCTTGGTCTC CTGGACGTGG TGACCACCAT GCTCAAGGAG AAGCAGACCC ATCTGGTCGA GGCGACGCTG CTGGAGGCGG GGCAGGGGCT GGTTTCGGGT GCTGCGGCCG CGCTCACCGG GTACGAGATC CATTTGGGAG AAAGCGTCCT CGGCAGCGGC GCACTTCCCT TCGCCCGTAT CGCCAGGCGC TCCGGAGGCG CCACCAGCAC CGAAGACGGC GCGGTGTCGC AGGACGGGCG GGTTTTCGGC ACCTACCTGC ACGGCATCTT CGATAACCAC GGTTTCAGGA CCGCGTTCCT GAACCGGATC CGGCGCGCCA AGGGTATGCC GGAACTGGCG GAGGCGGCGC AGGTTGCGGA TCCGTTCGAC CAGTTGGCCG ACCACATGGA AGAGCACTTG GACCTGGAAC GGATCTTCGG GATCTGCAAT GTCAATGAAC TTTTTGCCTG A
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Protein sequence | MSKLFVVGIG PGGLNHMTFE AREAVEKADV VVGYKTYLDF IEPLLSDKEV VSSGMMREVE RCSEALAIAA TGKTVALVSS GDAGIYGMAG LALELADAPG DGAPSPYPGV EIVIVPGVSA VQAAASVLGA PLMHDFAVIS LSDLLTPLDT IRQRLHAAAA ADFVVALYNP RSKGRVTQIE EAQAILIAAR GPKVPVGIVR NACREGEERI VTTLGEMLTH PIDMFSIVII GNASTRLSDD GRIVTPRGYA TRGEERKGGR KQQASAAAPA PNAQALMFCG TGSDVGKSVI TAGFCRILKR RGVSVAPFKS QNMALNSAVT PEGGEIGRAQ GVQAEACGIE PHTDMNPILL KPNSDTGSQV IVQGRVVRNM GVKEYNAYKP EAFLKVKESF QRLKERFDFI VMEGAGSIAE INLRAHDIAN LKVAAMAGAP AILVADIDRG GVFAQIVGTL ELLTPEEKAL VKGVIINKFR GDASLLTPGI EYVEQRTGVP VLGVLPWFKG ISLPEEDSVA LQRRAKPAAK EGAKLLVGVV RLSRIANYTD FSALEAEPDV ELHYIDSPRQ IDSLDLLILP GTKSTLADLG LLKENGMFTA VAQFKGPVVG ICGGYQMLGN MVLDPERVES AHDSEAGLGL LDVVTTMLKE KQTHLVEATL LEAGQGLVSG AAAALTGYEI HLGESVLGSG ALPFARIARR SGGATSTEDG AVSQDGRVFG TYLHGIFDNH GFRTAFLNRI RRAKGMPELA EAAQVADPFD QLADHMEEHL DLERIFGICN VNELFA
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