| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3532 |
|---|
| Symbol | |
|---|
| ID | 6780395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 4045608 |
|---|
| End bp | 4046432 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642769527 |
|---|
| Product | ABC-3 protein |
|---|
| Protein accession | YP_002140321 |
|---|
| Protein GI | 197119894 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAATTA CGGAAATGCT CAGCTACGGC TTCATGCAGA GGGCGCTCGT CGGCGGCTCG
CTGATCGCCA TCCTATGCTC GGTGCTCGGG GTGTTCCTCG TGCTGCGCCG CCTTTCCCTG
ATCGGCGACG GCCTGGCGCA CGTCACTTTC GGCAGCGTGG CGCTGGCGCT TCTTTTCAGG
TTGCAGTCGG TCTACATGAC CCTTGCCATC ATCCCGGTGG TGCTCGCCTC GTCGATGGGG
ATCCTGAAAC TGGCACAAAA GGCGAGGATC TACGGCGACG CCGCCATCGG CATCGTCTCG
GCCATCGGCA TCGCCACCGG CGTCATGCTG GCCAGCGTCG CCGGCGGCTT CAACGTCGAC
CTCTTCAGCT ACCTGTTCGG GAACATCCTC TCCATCAGCA GCAGCGAACT GGTGATAGCG
GCTTTGCTCT TCGTCATCGT CATCGCCTGC GTGGTGATGT TTTACAACGA GCTCTTCGCC
AGCACCTTCG ACGAGGACCT CGCCAAGAGT TCCGGCATCG ACACGGAACG CATCAATACG
GTGCTGGTGC TGATGACGGC GCTGACCGTG GTTCTGGCCA TGAAGGTGGT GGGGATCATG
CTGATTTCAG CGCTTTTGAT AATCCCTGCT GTATCCGCCT TGCAGATCGC CAAGGGGTTC
AAGTCGGCCA TCATTACCGC GGCGGTGATC GGGGTGGTGA CGGTGATCTG CGGAATATCC
CTCTCCTTCG TGATGAACCT CCCCTCCGGC GCCACCATCG TGCTGATAAA CTTCGCGGTT
TTGCTCGCCT CCTTCGGCGG GCGCGCCCTT CGGGGTCATA AATAA
|
|---|
| Protein sequence | MIITEMLSYG FMQRALVGGS LIAILCSVLG VFLVLRRLSL IGDGLAHVTF GSVALALLFR
LQSVYMTLAI IPVVLASSMG ILKLAQKARI YGDAAIGIVS AIGIATGVML ASVAGGFNVD
LFSYLFGNIL SISSSELVIA ALLFVIVIAC VVMFYNELFA STFDEDLAKS SGIDTERINT
VLVLMTALTV VLAMKVVGIM LISALLIIPA VSALQIAKGF KSAIITAAVI GVVTVICGIS
LSFVMNLPSG ATIVLINFAV LLASFGGRAL RGHK
|
|---|
| |