Gene Gbem_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3527 
Symbol 
ID6780390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp4040130 
End bp4040795 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID642769522 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_002140316 
Protein GI197119889 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TCGCTCCATC CATTCTTTCC GCGGACTTCG CCCGGCTGGG CGAGGAGATC 
AAGGCCATCG AGGCCGGCGG CGCCGACTAC GTCCACATCG ACGTCATGGA CGGCCAGTTC 
GTCCCCAACA TCACCATCGG CCCGCTGATC GTGGAAGCGG CGCGCCGGGT CACTACGCTT 
CCGCTCGACG TGCACCTGAT GATCGACAAC CCGGACCGCT ACATCCCCGA TTTCGCCAAG 
GCGGGCTCGG ACATCATCGT GGTCCATGCC GAGGCGACCA ACCACCTGCA CCGCACCGTG 
CAGCTGATCA AGTCGCTGGG GAAGAAGGCG GGCGTCTCGC TCAACCCGGC GACCCCGCTT 
AACCTTCTGG ATTACGTGAT GGAGGACCTC GACCTGATCC TCTTGATGAC GGTGAACCCC 
GGTTTCGGCG GGCAGTCGTT CATCGAGGCC TGCATCCCGA AGATCCAGGC CCTGCGCGCC 
ACCATGGATA GGCGTGGCAT CGAGGCGGAA CTCGAGGTCG ACGGCGGCGT CAAGATCGAC 
AACATAGCCC GCATCTCCCA TGCCGGGGCG GACGTCTTTG TGGCCGGCAG TGCCGTCTTC 
AACAGCCCCG ACTACGCGGC GACCATCGCC GAGCTGAAGA AAAAGGCCAA GGAGCCGGTG 
CTCTGA
 
Protein sequence
MKKIAPSILS ADFARLGEEI KAIEAGGADY VHIDVMDGQF VPNITIGPLI VEAARRVTTL 
PLDVHLMIDN PDRYIPDFAK AGSDIIVVHA EATNHLHRTV QLIKSLGKKA GVSLNPATPL 
NLLDYVMEDL DLILLMTVNP GFGGQSFIEA CIPKIQALRA TMDRRGIEAE LEVDGGVKID 
NIARISHAGA DVFVAGSAVF NSPDYAATIA ELKKKAKEPV L