Gene Gbem_3521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3521 
Symbol 
ID6780384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp4030350 
End bp4031036 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content63% 
IMG OID642769516 
ProductHhH-GPD family protein 
Protein accessionYP_002140310 
Protein GI197119883 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.318887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGACA CGCTGGACAA AGAACAGACG CGGGCGGCGC TTCTGGAACT CTTCGAGACG 
CTCTTAAGCC GCTACGGCGC GCTTAACTGG TGGCCCGCCG ACACCCCCTT CGAGGTCTGC 
GTCGGCGCCA TCCTGACCCA GAACACCAAC TGGCTCAACG TTGAAAAGGC AATAGTAAAC 
CTGAAACGAG AGGGGCTCCT CTCGGCAGAG GCGCTCCGGG AGATCGATGA GGGGCGGCTG 
GCCGAGTTGA TACGCCCCTC TGGCTTTTTC AACGTGAAGA GCGCGAGGCT GAAAGGGTTT 
GTCGGCTGGC TTTTCGAGCG CTACGGCTCC CTGGACGCCA TGTTCCAGGG GGACTGGATC 
GGCCTTCGGG AGGAACTGTC CGCGGTGCGC GGCATCGGGC CCGAGACCTG CGACTCGATC 
CTTCTCTACG CGGGGGGAAA GCCTTCCTTC GTGGTCGACG CCTATACCAG GCGTCTCTTC 
TCAAGGCTCG GGCTCATGCG GGAAGAGGAC GACTACCACC GGGTGCGCGC CCTTTTCATG 
GATCATCTTC CGGCCGAGGT GCCCCTATTC AACGAGTACC ACGCCCTGAT CGTCGAGCAG 
TGCAAGCGGC ACTGCCGCAA GAAGCCGCTG TGCGACGGCT GCCCGCTCAC CCGCTTTTGC 
ACCTTCCTCG CGGCAGGCCG CCCTTGA
 
Protein sequence
MKDTLDKEQT RAALLELFET LLSRYGALNW WPADTPFEVC VGAILTQNTN WLNVEKAIVN 
LKREGLLSAE ALREIDEGRL AELIRPSGFF NVKSARLKGF VGWLFERYGS LDAMFQGDWI 
GLREELSAVR GIGPETCDSI LLYAGGKPSF VVDAYTRRLF SRLGLMREED DYHRVRALFM 
DHLPAEVPLF NEYHALIVEQ CKRHCRKKPL CDGCPLTRFC TFLAAGRP