Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3513 |
Symbol | |
ID | 6780376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 4024494 |
End bp | 4025717 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642769508 |
Product | Tol-Pal system beta propeller repeat protein TolB |
Protein accession | YP_002140302 |
Protein GI | 197119875 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000266488 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAA TATTGCTGTT GGCCATGCTG CTCCTGGCGC CTCAAATGGC GCAGGCGGCA GAGGGATATA TAGACGTAAC GGCCCCGGTG AGCCGCAAGC TCAAGCTCTT CCCGGCTCCC GCCACCGGCC TCGCCGGGCA GGTGCCCCCG GAGGTGTCCA GGGAGCTCTC CGAGCTGTTC GGGATGGACC TGGGATTAGC CGGCCCCTTC GAGGTCTCCG GGGACGGCGC GGGCGCCGAC CTGATCCTGA AAAGTTCCTA CAGCGCGCAG GGGGGCAACA TCACCCTGGA GTGCCGACTG GTGGACCGGG TGCTGAACCG CGAGATCACC GCCAAGCGCT ACAGCGGGTC AGCGAAGGAA TTACGCCGCA TGGGGCACGC CTTCTCCGAC GAGGTGCTGC GCGCGGTGAC CGGGGAAAAA GGTCCCTTCA CCGGCAAGAT CGCCTACGTG ACCAAGGCCT CCGGCAACAA GGAGATCTTC GTCATGGACT ACGACGGGCA CAACCCGCAG AGGCTCACCA ACAACGGCTC CATCAACCTG AACCCCGACT TCGCCCCCTC CGGCAAGGAG ATCATCTACA CCTCCTACAA GAAAGGGAAC CCGGACCTGT ACCGCCGCGA ACTCTTCACC GGGCTCGAGG CGCGCATCTC CTCCCGAAGC GGCCTGAACG CCACGGGCGC CTACTCCCCA GACGGCAGCA AGATAGCCAT GGTGATGAGC AAGGACGGCA ATTCCGAGAT CTACCTGATC TCGCGGGAAG GAAAGGAGCT GGCGCGGCTC ACCAACAACC ACGCCATCGA CGTCTCCCCG GCCTGGTCGC CGGACGGCTC CCGCATCGTC TTCGTCTCCG ACCGCCTGGG CAAACCTCAG GTGTTCATAA TGAATGCGGA CGGCGGCAAC GTGCACCGGC TCACCGCCAA CGGCGCCTAC AACGTCACGC CCCGCTGGTC GCCCAAAGGG GACCGGATCG TGTACGCGCG CCAGGGAGGA GGCGGGTTCC AGATCTACGC CATCAATGCG GACGGCACCC AGGACACCCA ACTCACCAGC GCAGGTAGCA ACGAGCACCC CCGCTTCTCG CCGGACGGCC GCTTCATCGT CTTCAGCTCC ACCCGCGACG GCGCCGAGGC GATCTACCTG ATGCGCGCCG ACGGAAGCGG CCAGACCAGG GTATCCCCCA ACAAGTCCCA GAATTCCCAT CCGACATGGT CGGTAAATTG GTAA
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Protein sequence | MRIILLLAML LLAPQMAQAA EGYIDVTAPV SRKLKLFPAP ATGLAGQVPP EVSRELSELF GMDLGLAGPF EVSGDGAGAD LILKSSYSAQ GGNITLECRL VDRVLNREIT AKRYSGSAKE LRRMGHAFSD EVLRAVTGEK GPFTGKIAYV TKASGNKEIF VMDYDGHNPQ RLTNNGSINL NPDFAPSGKE IIYTSYKKGN PDLYRRELFT GLEARISSRS GLNATGAYSP DGSKIAMVMS KDGNSEIYLI SREGKELARL TNNHAIDVSP AWSPDGSRIV FVSDRLGKPQ VFIMNADGGN VHRLTANGAY NVTPRWSPKG DRIVYARQGG GGFQIYAINA DGTQDTQLTS AGSNEHPRFS PDGRFIVFSS TRDGAEAIYL MRADGSGQTR VSPNKSQNSH PTWSVNW
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