Gene Gbem_3513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3513 
Symbol 
ID6780376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4024494 
End bp4025717 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content64% 
IMG OID642769508 
ProductTol-Pal system beta propeller repeat protein TolB 
Protein accessionYP_002140302 
Protein GI197119875 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID[TIGR02800] tol-pal system beta propeller repeat protein TolB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000266488 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAA TATTGCTGTT GGCCATGCTG CTCCTGGCGC CTCAAATGGC GCAGGCGGCA 
GAGGGATATA TAGACGTAAC GGCCCCGGTG AGCCGCAAGC TCAAGCTCTT CCCGGCTCCC
GCCACCGGCC TCGCCGGGCA GGTGCCCCCG GAGGTGTCCA GGGAGCTCTC CGAGCTGTTC
GGGATGGACC TGGGATTAGC CGGCCCCTTC GAGGTCTCCG GGGACGGCGC GGGCGCCGAC
CTGATCCTGA AAAGTTCCTA CAGCGCGCAG GGGGGCAACA TCACCCTGGA GTGCCGACTG
GTGGACCGGG TGCTGAACCG CGAGATCACC GCCAAGCGCT ACAGCGGGTC AGCGAAGGAA
TTACGCCGCA TGGGGCACGC CTTCTCCGAC GAGGTGCTGC GCGCGGTGAC CGGGGAAAAA
GGTCCCTTCA CCGGCAAGAT CGCCTACGTG ACCAAGGCCT CCGGCAACAA GGAGATCTTC
GTCATGGACT ACGACGGGCA CAACCCGCAG AGGCTCACCA ACAACGGCTC CATCAACCTG
AACCCCGACT TCGCCCCCTC CGGCAAGGAG ATCATCTACA CCTCCTACAA GAAAGGGAAC
CCGGACCTGT ACCGCCGCGA ACTCTTCACC GGGCTCGAGG CGCGCATCTC CTCCCGAAGC
GGCCTGAACG CCACGGGCGC CTACTCCCCA GACGGCAGCA AGATAGCCAT GGTGATGAGC
AAGGACGGCA ATTCCGAGAT CTACCTGATC TCGCGGGAAG GAAAGGAGCT GGCGCGGCTC
ACCAACAACC ACGCCATCGA CGTCTCCCCG GCCTGGTCGC CGGACGGCTC CCGCATCGTC
TTCGTCTCCG ACCGCCTGGG CAAACCTCAG GTGTTCATAA TGAATGCGGA CGGCGGCAAC
GTGCACCGGC TCACCGCCAA CGGCGCCTAC AACGTCACGC CCCGCTGGTC GCCCAAAGGG
GACCGGATCG TGTACGCGCG CCAGGGAGGA GGCGGGTTCC AGATCTACGC CATCAATGCG
GACGGCACCC AGGACACCCA ACTCACCAGC GCAGGTAGCA ACGAGCACCC CCGCTTCTCG
CCGGACGGCC GCTTCATCGT CTTCAGCTCC ACCCGCGACG GCGCCGAGGC GATCTACCTG
ATGCGCGCCG ACGGAAGCGG CCAGACCAGG GTATCCCCCA ACAAGTCCCA GAATTCCCAT
CCGACATGGT CGGTAAATTG GTAA
 
Protein sequence
MRIILLLAML LLAPQMAQAA EGYIDVTAPV SRKLKLFPAP ATGLAGQVPP EVSRELSELF 
GMDLGLAGPF EVSGDGAGAD LILKSSYSAQ GGNITLECRL VDRVLNREIT AKRYSGSAKE
LRRMGHAFSD EVLRAVTGEK GPFTGKIAYV TKASGNKEIF VMDYDGHNPQ RLTNNGSINL
NPDFAPSGKE IIYTSYKKGN PDLYRRELFT GLEARISSRS GLNATGAYSP DGSKIAMVMS
KDGNSEIYLI SREGKELARL TNNHAIDVSP AWSPDGSRIV FVSDRLGKPQ VFIMNADGGN
VHRLTANGAY NVTPRWSPKG DRIVYARQGG GGFQIYAINA DGTQDTQLTS AGSNEHPRFS
PDGRFIVFSS TRDGAEAIYL MRADGSGQTR VSPNKSQNSH PTWSVNW