Gene Gbem_3505 details

Gene Information

• Locus tag: Gbem_3505
• Symbol: dnaK
• ID: 6780368
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 4016560
• End bp: 4018482
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642769500
• Product: molecular chaperone DnaK
• Protein accession: YP_002140294
• Protein GI: 197119867
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00228392
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAGAG TAATAGGAAT AGACCTCGGG ACCACCAACT CCTGCGTGGC AGTGATGGAA 
GGTGGGGAAC CGGTTGTCAT AGCGAACGCA GAAGGTAGCC GCACCACCCC TTCCATGATC 
GCCTTCGCCG AAAGCGGCGA GCGTCTGGTG GGGCAGCAGG CCAAGCGCCA GGCCGTCACC 
AACCCGGAAA ACACCCTGTA CGCCATCAAG CGCCTGATCG GCCGCAAGTT CGAAACCGAG 
GCGGTCAAGA AGGACATCGC CATCTCCCCG TTCAAGATCG TCAAGGCCGA CAACTCCGAC 
GCCTGGGTCG AGGTCAGGGG CCAGAAGTAC TCGCCCCCCG AGATCTCTGC CATGGTGCTG 
CAGAAGATGA AGAAGACCGC CGAGGACTAC CTGGGCGAGG CCGTCACCGA CGCGGTCATC 
ACCGTTCCCG CTTACTTCGA CGACTCCCAG CGCCAGGCGA CGAAAGACGC CGGGAAGATC 
GCCGGCCTCA ACGTGCTCCG CATCATCAAC GAGCCGACCG CGGCAGCGCT TGCCTACGGC 
CTCGACAAGA AGAAGGACGA GAAGATCGCC GTATTCGACC TTGGCGGCGG CACCTTCGAC 
GTCTCCATCC TGGAACTCGG CGAAGGGGTC TTCGAGGTGA AGTCCACCAA CGGCGACACC 
TTCTTAGGCG GCGAGGACTT CGACCAGAAG ATCATCGACC ACATAGCCGA CGAGTTCAAA 
AAGGACCAGG GGATCGATCT CCGCGGCGAC AAGATGGCCC TGCAGAGGCT GAAAGAGGCG 
GGCGAGAAGG CGAAGTGCGA ACTCTCCACC TCGCTTGAGA CCGACATCAA CCTCCCCTTC 
ATCACCGCCG ACGCCTCCGG GCCCAAGCAC CTGACCATGA AGCTCACCCG CGCTAAGCTC 
GAGTCCATCT GCGCCGAGCT GATCGCCAAG CTGGAAGGCC CCTGCCGCAC CGCACTGAAA 
GACGCCGGGC TCTCCGCCTC CGACATCGAC GAAGTCATCC TGGTCGGCGG CATGACCCGC 
ATGCCGATCG TGCAGAAGAA GGTGCAGGAC ATCTTCGGCA AGCTCCCCAA CCGCGGCGTG 
AACCCCGACG AGGTGGTCGC CATCGGCGCC GCCATCCAGG GCGGCGTTCT GCGCGGCGAC 
GTGAAGGACG TGCTCCTTCT CGACGTCACC CCGCTTTCCC TCGGGATCGA AACCCTGGGC 
GGCGTGTTGA CCAAGCTGAT CGACAAGAAC TCCACCATCC CCTGCAGAAA GAGCCAGGTC 
TTCTCCACCG CCGCCGACAA CCAGCCGGCG GTCAGTATCC ACGTGCTGCA GGGCGAGCGC 
GAGATGGCGG CCGACAACAA GACGCTCGGC AACTTCGAGC TCTCCGGCAT TCCGGCGGCT 
CCCCGCGGCG TCCCGCAGAT CGAGGTGACC TTCGACATCG ACGCCAACGG CATCGTCCAC 
GTCTCCGCCA AGGACCTCGG CACCGGCAAG GAGCAGTCCA TCCGCATCAC CGCTTCCTCT 
GGCCTTTCCA AGGAGGAGGT CGAGAAGATG GTGCGCGAGG CCGAGGCGCA CGCGGCCGAC 
GACAAGAAAA AGCGCGAGCT GATCGAGGCG AAGAACCAGG CGGACAACCT GATCTACCAG 
ACCGAGAAGT CCCTGACCGA GTTCGGCGAC AAGATCGACG CCTCCGAGAA GCAGAAGATC 
GAGGAAGGGG TCGCCGCCCT CAAGAAGGCC CTGGAAGGAA GCGACGCCGA CGAGATCAAG 
AAGGCAAGCG ACTCCCTGAT GCAGGCTTCC CACAAGCTGG CCGAGGCGGT CTACGCTAAG 
ACCCAGGGCG CGGGCGCCGA GGGCGGCGAG CAGCCGCACG GTGAGCAGGA GGCCGGCGGC 
GCGGCCAAGG GGGAGAAGGT CGTCGATGCC GACTTCGAGG AAGTGAAGGA CGACAAGAAG 
TAA 

 

Protein sequence

MSRVIGIDLG TTNSCVAVME GGEPVVIANA EGSRTTPSMI AFAESGERLV GQQAKRQAVT 
NPENTLYAIK RLIGRKFETE AVKKDIAISP FKIVKADNSD AWVEVRGQKY SPPEISAMVL 
QKMKKTAEDY LGEAVTDAVI TVPAYFDDSQ RQATKDAGKI AGLNVLRIIN EPTAAALAYG 
LDKKKDEKIA VFDLGGGTFD VSILELGEGV FEVKSTNGDT FLGGEDFDQK IIDHIADEFK 
KDQGIDLRGD KMALQRLKEA GEKAKCELST SLETDINLPF ITADASGPKH LTMKLTRAKL 
ESICAELIAK LEGPCRTALK DAGLSASDID EVILVGGMTR MPIVQKKVQD IFGKLPNRGV 
NPDEVVAIGA AIQGGVLRGD VKDVLLLDVT PLSLGIETLG GVLTKLIDKN STIPCRKSQV 
FSTAADNQPA VSIHVLQGER EMAADNKTLG NFELSGIPAA PRGVPQIEVT FDIDANGIVH 
VSAKDLGTGK EQSIRITASS GLSKEEVEKM VREAEAHAAD DKKKRELIEA KNQADNLIYQ 
TEKSLTEFGD KIDASEKQKI EEGVAALKKA LEGSDADEIK KASDSLMQAS HKLAEAVYAK 
TQGAGAEGGE QPHGEQEAGG AAKGEKVVDA DFEEVKDDKK