Gene Gbem_3463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3463 
Symbol 
ID6780325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3976968 
End bp3978281 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content65% 
IMG OID642769457 
Productthiamine biosynthesis protein ThiC 
Protein accessionYP_002140252 
Protein GI197119825 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0422] Thiamine biosynthesis protein ThiC 
TIGRFAM ID[TIGR00190] thiamine biosynthesis protein ThiC 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGC TCGAATACGC CCGCAAGGGG ATCATTACCG ACAAGATGAA GACCGCGGCC 
CTCGCCGAAG GGGTGGATCC GGAATTCATC CGCGCCGGTA TCGCCGCGGG CAACATCATC
ATCTGCCACA ACAACAAGCA CGCAAACGGG ACCCCACTCG CAGTGGGCAA GGGGCTCAGA
ACCAAGGTGA ACGCCAACAT CGGCTCCTCC GCCGACGACC TCAACTTCGA GAACGAGCTG
GAGAAGGTGC GCGTGGCCGT GGCCAGCGGC GCCGACGCCA TCATGGACCT CTCGACCGGC
GGACCGGTGG ACGAGATCCG CCGCGCCGTG ATCGCCGAGA CCTCCGCCTG CATCGGCACC
GTGCCGCTGT ACCAGGCGGC ACTCGACGCG GTCAGAAAGC ACAAGAAGGC GATCGTGGAG
ATGACGGTCG AGGACATCTT CCAGGGGGTG ATCAAACACG CCGAGGACGG CGTCGACTTC
ATCACCGTGC ACTGCGGAGT GACCCGTTCG ACGGTCGAGC GCATGCGCAA GGAAGGGCGC
ATCATGGACG TGGTCTCCCG CGGCGGCGCC TTCACCATCG AGTGGATGGC CCACAACAAC
GCGGAAAACC CGCTCTACGA GCACTTCGAC CGCCTGCTGG AAATCGTCAA GGCCTACGAC
ATGACCCTGT CGCTGGGAGA CGGCTTCCGC CCCGGCTGCC TGGCCGATGC GACCGACCGC
GCCCAGATCC ACGAGCTGAT CCTTTTGGGC GAACTCACCC AGCGCGCGCA GGAGTACGGC
GTGCAGGTAA TGATCGAGGG GCCCGGCCAC ATGCCGCTGA ACCAGATCGA GGCCAACATC
CTCTTGCAGA AGAGGCTTTG CCACGGCGCT CCCTTCTACG TGCTCGGGCC GCTGGTCACC
GACATCGCAC CGGGCTACGA CCACATCACC TCGGCCATCG GCGGCACCAT AGCCGCGGCC
GCCGGGGCCG ACTTCCTCTG CTACGTGACA CCTTCGGAGC ACCTGAAGCT CCCGAGCGTC
GAGGACGTGC GCGAGGGTGT CATGGCGAGC CGCATCGCGG CACACGCAGC CGACATCGTC
AAGGGGGTCA AGGGGGCCAT GGAGAAGGAC AACGAGATGG CCCGCTGCCG CAAGAAGCTC
GATTGGGAGG GGCAGTTCGC CCTCGCCATC GACCCGGTAA AGGCGCGCCG CCTGAGGGAG
GAGTCGGGGG TCGCCGACCA CGGCGCCTGC ACCATGTGCG GCGAGTTCTG CGCCTACAAG
GTGATGGACG ACGCCACCCA GCGCGAAAAG GCCAACTCAG CCAACGCGGC CTAA
 
Protein sequence
MTQLEYARKG IITDKMKTAA LAEGVDPEFI RAGIAAGNII ICHNNKHANG TPLAVGKGLR 
TKVNANIGSS ADDLNFENEL EKVRVAVASG ADAIMDLSTG GPVDEIRRAV IAETSACIGT
VPLYQAALDA VRKHKKAIVE MTVEDIFQGV IKHAEDGVDF ITVHCGVTRS TVERMRKEGR
IMDVVSRGGA FTIEWMAHNN AENPLYEHFD RLLEIVKAYD MTLSLGDGFR PGCLADATDR
AQIHELILLG ELTQRAQEYG VQVMIEGPGH MPLNQIEANI LLQKRLCHGA PFYVLGPLVT
DIAPGYDHIT SAIGGTIAAA AGADFLCYVT PSEHLKLPSV EDVREGVMAS RIAAHAADIV
KGVKGAMEKD NEMARCRKKL DWEGQFALAI DPVKARRLRE ESGVADHGAC TMCGEFCAYK
VMDDATQREK ANSANAA