| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3429 |
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| Symbol | |
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| ID | 6780291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3942445 |
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| End bp | 3942963 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642769423 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_002140218 |
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| Protein GI | 197119791 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000572848 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGGTA GTAAAAAATT ATTGATTGGT AAGATCCAGG GGACGCACGG GATCAAGGGA
CAGTTGCGGG TCATTCCCTT TGCGGGGGAT GCTTCCAGTA TCTCGCAACT GAACGAGGTC
TTCGTAAAGT CTCCGACAGC TGCCTTGGAG CCGTTCGCGG TGGTTTCAGC CAAGGCGCAC
GGCAAAAGGG TGATTCTGAC CCTCAAGCCG TTTGACAACA TAAACCAGGT GCTGCACCTG
GTCGGCCGAG AGATCTACGC CGACCGGGTG TCGCTTCCGG AACTCCCCGA CGACGAGTTC
TACTGGTCCG ACCTCCTGGG ACTCCAGGTG GCAACCTCGG ACGGGGAAGA GCTGGGAGAG
CTGGTCGACA TCATCGAGAC CGGCAGCAAC GACGTTTATG TGGTAAAGAA GGGCGCGCTC
GAGGTGCTTA TCCCCGCGCT CGAGGATGTC GTGTTATCGA TCAACCTGGC TGAAGGGCGC
ATGACGGTCT CTCTTCCCGA GGGGCTGCTC GATCTATGA
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| Protein sequence | MSGSKKLLIG KIQGTHGIKG QLRVIPFAGD ASSISQLNEV FVKSPTAALE PFAVVSAKAH
GKRVILTLKP FDNINQVLHL VGREIYADRV SLPELPDDEF YWSDLLGLQV ATSDGEELGE
LVDIIETGSN DVYVVKKGAL EVLIPALEDV VLSINLAEGR MTVSLPEGLL DL
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