| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3428 |
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| Symbol | trmD |
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| ID | 6780290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3941699 |
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| End bp | 3942448 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642769422 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_002140217 |
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| Protein GI | 197119790 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00116062 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCG ACATTCTGAC CCTGTTTCCG GCCATGTTCG AAGGGCCGCT GACGGAAAGC
ATCCTGAAGC GGGCTAGCGA CAAGGGGCTC ATAGAGGTCG CGCTGCACAA CATCCGCGAC
TGGGCCTTCG ACAAGCACGC CACGGCCGAC GATGCCCCCT ACGGCGGCGG CGCCGGGATG
GTGATGAAGG TCGAGCCGAT AGCCGGTGCC ATCGAGGCGG TTAAGGCGAA GAACCCCAAC
TCGAAGGTGA TACTGACCAC CCCCTGCGGG CGTCCTTTCA ACCACCAGTT TGCCGAGGAG
CTCTCCCGCG AGGAAGGGGT TGTCATCATC TGCGGCCGCT ACGAGGGGGT CGACGAGAGG
GTGCGCACCC TGTTCGTGGA CGACGAGATC TCGTTAGGGG ATTTCGTGCT GACCGGCGGG
GAGATCGCCG CCATGGTCAT CGTCGATGCC GTTTCCCGGC TGGTGCCGGG CGTATTGGGT
TCCGACGAGT CGGCGCAGTA CGATTCATTT GCAGATGGGC TTCTGGAGTA CCCGCAGTAC
ACGAGGCCCC CCGAATTCAG GGGCGAGAAG GTTCCCGACA TCCTCCTTTC CGGCAACCAT
GCCGAGATCG CCAAGTGGCG GCGCAAGGAG CAGATGAGAA GAACGCTCGC CTCCCGTCCC
GAGCTCCTCG ATGGGATCGA GTGGAGCAAG TCGGACAAGA AACTATTTGT CGAGGTCGAA
AAGGCCAATC AGGAGAAGGT GGCCAGATGA
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| Protein sequence | MKFDILTLFP AMFEGPLTES ILKRASDKGL IEVALHNIRD WAFDKHATAD DAPYGGGAGM
VMKVEPIAGA IEAVKAKNPN SKVILTTPCG RPFNHQFAEE LSREEGVVII CGRYEGVDER
VRTLFVDDEI SLGDFVLTGG EIAAMVIVDA VSRLVPGVLG SDESAQYDSF ADGLLEYPQY
TRPPEFRGEK VPDILLSGNH AEIAKWRRKE QMRRTLASRP ELLDGIEWSK SDKKLFVEVE
KANQEKVAR
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