Gene Gbem_3425 details

Gene Information

• Locus tag: Gbem_3425
• Symbol: rnhB
• ID: 6780287
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 3939701
• End bp: 3940393
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642769419
• Product: ribonuclease HII
• Protein accession: YP_002140214
• Protein GI: 197119787
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0164] Ribonuclease HII

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGGTC TTTTTCCCGA CAACCCGGAA GCGCCGATTG ACCTGCTCGC ACTCGAAGGG 
CAGGCGCTTC GTCGCGGCTA CTTTCGGATA GCGGGGATCG ATGAGGCCGG GCGTGGCCCA 
CTGGCGGGGC CGGTCGTGGC CGCCGCAGTG ATGCTGCCTG CCGGTCTGCT GCTCCCCGGG 
GTTAACGACT CCAAACAGCT TACTGAAGAA AAGAGGGAAG AGCTTTTCGA CGTGATCCAT 
CGCGAGGCGC TTGCGGTTGG CGTCGGCATC GGCGACCACG CCCTGGTCGA CAGCATCAAC 
ATCCTGCAGG CGACCCTCAG CGCCATGCGC GACGCGGTCC GCGCCCTGAG CATAACCCCC 
GGTTTCCTCC TCATCGACGG CATCTCCAAC ATCCCCATGA ACATCCCGCA GCGTACCGTG 
AAAAAGGGAG ACTCCCTGAG CCTCTCGATA GCGGCCGCCT CAATAATCGC CAAGGTCACC 
CGGGACCGGA TGATGGTTGA GTACGACGCC CAGTACCCGG GCTACGGCTT CGCCAGCCAC 
AAGGGTTACG GCGCCGCGTC GCACCTGGCC GCCATCGCCG AACTGGGACC ATGTCCCATC 
CATCGCAAAA CCTTCAGCGG TGTCAAAGAG CATCTTCCTT CCCAGCCCGA CAGTGACACT 
GCAGGACCTT CCACTGGCTT ATTCTCTTTC TGA 

 

Protein sequence

MTGLFPDNPE APIDLLALEG QALRRGYFRI AGIDEAGRGP LAGPVVAAAV MLPAGLLLPG 
VNDSKQLTEE KREELFDVIH REALAVGVGI GDHALVDSIN ILQATLSAMR DAVRALSITP 
GFLLIDGISN IPMNIPQRTV KKGDSLSLSI AAASIIAKVT RDRMMVEYDA QYPGYGFASH 
KGYGAASHLA AIAELGPCPI HRKTFSGVKE HLPSQPDSDT AGPSTGLFSF