Gene Gbem_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3418 
Symbol 
ID6780280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3934623 
End bp3935642 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content65% 
IMG OID642769412 
Productaromatic amino acid beta-eliminating lyase/threonine aldolase 
Protein accessionYP_002140207 
Protein GI197119780 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACGG TAGATCTGAG AAGCGACACG GTGACATCGC CGTCGCAGGC GATGCGTCGG 
GAAATGGCGA ATGCCCCGGT AGGAGACGAC GTCTACGGGG AGGACCCGAC GGTAAACCGG
CTGGAGTCCA TGGCGGCAGA GTTGCTGGGG AAGGAGGCGG CGCTCTTCGT CCCCACGGGG
ACCATGGGGA ACCTGCTTGC CCTCTTATCG CACTGCGGAC GCGGTGACGA GTACATCGCC
GGGCAGGAAG CGCACATCTA CCGGTGGGAG GGAGGAGGAG GCGCCATCTT CGGCGGGATC
CAGCCGCAGC CGATCGACTT CGAAGAGGAT GGGACGCTCG ATCTCGAAAA GGTGCGACGC
GTCGTGAAGC CCGCGGATTA CCATCACCCC GTCACCAGGC TCCTCTGCCT TGAGAACACT
CAGGGGGGGA AAGTGTTGCC GCTCGACTAT CTGGCAAAGG CTGCGGAGCT TGCCCAAGGC
CTCGGGCTTT CCCTGCATCT CGACGGGGCC CGAGTCTTCA ATGCGGCCGT GTACCTGGGG
GTCCCCGTCG CCACCATCGC CGCCCATTTC GATTCGGCCT CGGTCTGCCT CTCCAAGGGA
CTTGGCGCCC CGGCAGGTAC GGTACTTTGC GCCAGTAGGG AGCTCATCGG CCGCGCGCGC
CGCTGGCGCA AAGTAGCCGG CGGCGGCATG CGCCAGGCCG GCATTCTGGC CGCGGCCGGC
ATACATGCAC TGGAGAAGAA CCTGCAGCGA CTGACCGAGG ACCACGAGAA CGCGGAACTC
CTGGCCGCGG GCCTTGGGCA CATAGAAGAA CTCATGGTGA GCCAGGCGCG CACCAACATC
CTCTTCGTCA CCCCACCCGC TGGCAGCGCC GACCGCCTGC GCCAGACCCT CGCCACCGAA
GGGATACTCC TTGGCGGGGG GGACCAGATA CGCCTGGTCA CCCACCTTGA CGTAACCGGC
GCGGACGTGG AACGCACCGT CGTCGCCTTC AAACGCTTCT TTGCAGCACG GGGGAACTGA
 
Protein sequence
MKTVDLRSDT VTSPSQAMRR EMANAPVGDD VYGEDPTVNR LESMAAELLG KEAALFVPTG 
TMGNLLALLS HCGRGDEYIA GQEAHIYRWE GGGGAIFGGI QPQPIDFEED GTLDLEKVRR
VVKPADYHHP VTRLLCLENT QGGKVLPLDY LAKAAELAQG LGLSLHLDGA RVFNAAVYLG
VPVATIAAHF DSASVCLSKG LGAPAGTVLC ASRELIGRAR RWRKVAGGGM RQAGILAAAG
IHALEKNLQR LTEDHENAEL LAAGLGHIEE LMVSQARTNI LFVTPPAGSA DRLRQTLATE
GILLGGGDQI RLVTHLDVTG ADVERTVVAF KRFFAARGN