| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3402 |
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| Symbol | |
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| ID | 6780265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3917980 |
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| End bp | 3920490 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642769398 |
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| Product | Nucleotidyl transferase |
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| Protein accession | YP_002140193 |
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| Protein GI | 197119766 |
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| COG category | [G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1109] Phosphomannomutase
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCAG TGATTATGGC GGGTGGCTTT GGTACCCGCA TGCAGCCGCT TACCTGCAAC
ATCCCCAAGC CGATGGTTCC GCTGATGAAC CGTCCCATCA TGCTCCACAT CGTGGAACTT
CTGAAGAAAT ACCAGATTAC CGACTTGGTC ATGCTGCTAT ACCACCAGCC CAGCGTGATC
AAGAACTTCT TTAGGGACGG CGCCGACCTC GGCGTAAGGA TCACCTACGT CACCCCCCTT
GAGGACATGG GGACGGCGGG GGCGGTGAAA TGCGCGGAGA AATACCTGGA CGAGCGCTTC
CTGATCATAA GCGGCGACCT CCTTACCGAT TTCAACCTGC AGAAGGTGAT CGACTTCCAC
GATAGCAACA AGGCCTTGGC CACCATCACG CTCACCTCCG TCAAGGACCC GCTGCAGTTC
GGCGTGGTGA TCACGGACAA GGAGAAGCGG ATCACCCAGT TCCTGGAGAA GCCGGGGTGG
GGCGAGGTGA TCTCGGACAC CATCAATACC GGGATCTACG TGCTCGAGCC GGAGATCTTC
AAGTACATCC CAGAGGGGGA GAACTTCGAC TTCTCGCAAG ACCTCTTCCC GCTCCTTTTG
AAAAAGAAAG CCCAGCTATT CGGCTTCCCG GTCAAAGGGT ACTGGCGCGA CATCGGCAAC
ACCGACTCCT ACCGCGAGGC GCACCACGAC ATACTGAAGG GGAAGGTAGG CGTCAAGGTG
GACGAGTCCA GGCGGGAGAT GGCGGGGGCG GACCTGCGCC TGGGGCTCGA CGTAAAGCTC
GGGGAGGGAA CGGTGGTCGA GGGGACCGTG GTGATCGGGG ACAACTCCCA GGTCAAGGGG
GGCTCCCAGA TCAAGGACAG CGTGATCGGC CGCAACTGCA CCGTCGAGCC GGGGGTCAAG
CTCTCCCGCG CCGTCATCTG GGACAACGTC TACATCAAGA AGGGGGCGAA AATCACCGAC
TGCGTCATCT GCAACAACGT GAGCGTCGGC CCGTCCACCA CGATGGAAGA GGGGGGGGTG
GTCGCCGACG ACACCTCCAT AGGCGAGGAG AGCTACATAA AAAGGGACGT GAAGATCTGG
CCCCGCAAGG TGATCGAGTC CGGCTCCACC GTCACCGGGA ACCTGATCTG GGGGGAGCGC
TGGAAGAAGT CGCTCTTCGA GGGGGAGATG ATCAAGGGGC TCACCAACAT CGAGCTGACC
CCCGAGTTCG TGGCCAAGCT CGGCTGCGCC TACGGCACCT CGCTCCCCAA GGGAAGCCAT
GTCCTCGTGG GGCGCGACGC GACCCTCTCC TCCCGCATGC TGAAGAGAAG CTTCCTTGGG
GGGATACTCT CGGCGGGGGT CAACGTGCGC GACATCAGGA TGGTTTCGCT CCCGATCCTG
CGCTACAAGC TGCGCACCTT CGGCGAGGTG GGGGGGGCGC ATTTCCGCCA GTCTACAGAC
GATCCCGCTA CCACCGAAAT CGTCTTCCTG GATGCCGACG GACTCGATTT CTCCTCCTCC
ATGGGGAAGA ACGTGGAGCG GATCTTCTAC AAGGAGAATT TCCGGCGCGC CCATTACATG
GAGCCCGGGG GGATTACGGA ACTCCCGCAG GTGATGGACT TCTACCGCGA GGGTTTTTTC
CGCGGCCTGG ACCAGCAGGT CATCAGGGGG GCGGGCGCCA AGGTGGTGAT CGACTTCAAC
CACTCCCCGG CGGGGCAGAT CCTGCCTCAG ATTCTGAACG ACCTGGGGTG CGAGGTGATC
GGGCTCAACA CCTATCTCGA CGAGCAGCGC GGCTCGAAAA CGGTGGACGA GAAGCCTAAC
TCCCTGCAGC AATTGGCCAA GATCGTGGTC ACCCTGGAGG CGAGAGCGGG CTTTTGGCTC
GACCCGACCG CCGAGGAAAT AGTGCTCGTC GACGAGACCG GCAAGATCCA CGCGCCGGAG
GAGCTCCTCT GCCTCATGAC CGCGCTCATG CTGAAAAGCG GCGCCAGGGG CGCTCTCGCC
GTCCCGGTCT CGGCCCCCTC GGTCATCGAG CAGATGGCGC AGGAAAACGG CTGCTCGGTG
CGCCGCACGA AGAGCATGGA GCGCTCCATG ATCGAGGCGG CCATCTCCCC CGAGGTGGTC
ATGGCCGGAT CGATGGGGGG GCGTTTCGCC TTCCCCAAGT TCCAGGCCGC CTTTGACGGC
ATGTTCACCG TCGCCAAGAC CATCGAACTC TCCATCACCG TCGGCACCCC GCTCTCGCGC
GTGCTTAGGG AGGTGCCGCG CAGCTCCTTC TTGCAGGGAA AAGTCCCCTG CGTCTGGGAG
AAAAAGGGGG GAATCATGCG CAAGATGAGC GAGGACAGCC TCGACAAGGA GGCGAGCTTC
ATCGATGGCA TCAAGGTCTC TTTCGGCCAG GACTGGGTGC TGGTGCTGCC TGACCAGTAC
CAGCCCGTAA TCCACGTGGT GGCCGAGGCG AAGGAGCAGA AGCGGGCGGA GAAGCTTCTC
GAGCAGTACA TGCAGAAGGT GGAGAACTGG AAGAAGGAAC TGGGGCAGTA G
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| Protein sequence | MKAVIMAGGF GTRMQPLTCN IPKPMVPLMN RPIMLHIVEL LKKYQITDLV MLLYHQPSVI
KNFFRDGADL GVRITYVTPL EDMGTAGAVK CAEKYLDERF LIISGDLLTD FNLQKVIDFH
DSNKALATIT LTSVKDPLQF GVVITDKEKR ITQFLEKPGW GEVISDTINT GIYVLEPEIF
KYIPEGENFD FSQDLFPLLL KKKAQLFGFP VKGYWRDIGN TDSYREAHHD ILKGKVGVKV
DESRREMAGA DLRLGLDVKL GEGTVVEGTV VIGDNSQVKG GSQIKDSVIG RNCTVEPGVK
LSRAVIWDNV YIKKGAKITD CVICNNVSVG PSTTMEEGGV VADDTSIGEE SYIKRDVKIW
PRKVIESGST VTGNLIWGER WKKSLFEGEM IKGLTNIELT PEFVAKLGCA YGTSLPKGSH
VLVGRDATLS SRMLKRSFLG GILSAGVNVR DIRMVSLPIL RYKLRTFGEV GGAHFRQSTD
DPATTEIVFL DADGLDFSSS MGKNVERIFY KENFRRAHYM EPGGITELPQ VMDFYREGFF
RGLDQQVIRG AGAKVVIDFN HSPAGQILPQ ILNDLGCEVI GLNTYLDEQR GSKTVDEKPN
SLQQLAKIVV TLEARAGFWL DPTAEEIVLV DETGKIHAPE ELLCLMTALM LKSGARGALA
VPVSAPSVIE QMAQENGCSV RRTKSMERSM IEAAISPEVV MAGSMGGRFA FPKFQAAFDG
MFTVAKTIEL SITVGTPLSR VLREVPRSSF LQGKVPCVWE KKGGIMRKMS EDSLDKEASF
IDGIKVSFGQ DWVLVLPDQY QPVIHVVAEA KEQKRAEKLL EQYMQKVENW KKELGQ
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