Gene Gbem_3397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3397 
Symbol 
ID6780260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3912023 
End bp3912817 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content65% 
IMG OID642769393 
Productprotein of unknown function DUF152 
Protein accessionYP_002140188 
Protein GI197119761 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.97667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGC AAAAAGCAGG AAAGATCCAA TACCTGAAAC CCGCCCTCGG CGCAGGCGGA 
GTCGTAGCCG GCTTCACCAC CCGCCACGAG GGTGTTTCCC GCCCGCCATA CAACTCGCTG
AACCTGGGGA GCAACACCCT CGATTCCTCC CACAACGTGG AAGGAAACCG CAGCCTCCTG
GCCCGAAGCC TCGGCTCAAC CCTGGACCGA TTCCTGACCG TGAGCCAGGT GCACGGCACG
GACCTCCTGG TGATCGACGC CCCCAACCCG GAGCTGTCCC ACTTCCTGAA GCTCGAATGC
GACGGCATCG TCACCAATCA GCCGGGGATC ATGATCGCCA TCTGCGTGGC CGACTGCGTG
CCGATCCTTC TGCACGACCC GGTGCAGCGC GTAGTGGCCG CCCTGCACGC GGGATGGCAG
GGGACGGTGG CCAACATCGT CGGCAAAGGG GTCGAGGCGA TGACCACCCT CTTTGGCTGC
GACCGCAAAG ACATACGCGC TGCCCTCGGC CCGCACATCT CCGGCTGCTG CTACGAGGTG
GACCAGCCGG TCCGCGACGC CTTTAAAAAG GCCGGCGCCG CCTGGGATCT GGCGGCCAAG
GAGCAGGGAG ACGGCAAATG GCTTCTGGAC CTGGGAGAGG CGAACCGGCT CTTGCTCAAG
GACGCCGGGC TTCGCGCCGA CCAGATCCAG TCCAGCGACC TCTGCGTAAG CTGCAACCAG
GAGCTCTTCT TCTCCTACCG CCGCGACGGC GGGGATACCG GCAGACAGGT CGGGTTCATC
ATGCTGGAGG CATAG
 
Protein sequence
MEMQKAGKIQ YLKPALGAGG VVAGFTTRHE GVSRPPYNSL NLGSNTLDSS HNVEGNRSLL 
ARSLGSTLDR FLTVSQVHGT DLLVIDAPNP ELSHFLKLEC DGIVTNQPGI MIAICVADCV
PILLHDPVQR VVAALHAGWQ GTVANIVGKG VEAMTTLFGC DRKDIRAALG PHISGCCYEV
DQPVRDAFKK AGAAWDLAAK EQGDGKWLLD LGEANRLLLK DAGLRADQIQ SSDLCVSCNQ
ELFFSYRRDG GDTGRQVGFI MLEA