Gene Gbem_3393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3393 
Symbol 
ID6780256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp3908345 
End bp3908944 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content57% 
IMG OID642769389 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002140184 
Protein GI197119757 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.000124891 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAGAGA AGATAAAGCA GGAAATTAGA GAGATGAAGC TGGGTGAGAA GGTGCGTGGC 
CTGCGCCAGG AACAGCGGCT TACGCTCCAG GCACTTGCCG ACATGACCGG GCTTTCGAAG 
CCGCTGCTGT CGCAGATAGA GAACGACCAG GTTACGCCCC CCATCGCGAC CCTGTTGAAG 
ATCGCCAAAG GTCTCAAGGT CGGGATACAT TACTTCTTCG AGGAGGCCGG GGACCGCCAG 
AAATTCATGC TGACCCGCGG GGAGCAGTCT CCGCTTGGCA GCCAGCGCCG GCCCGGCAAG 
GAGAATATCC AGCACGGCTA TATGTATAAG CCGTTGGCCC CCGGGATGCG GCAAAAGAAG 
GTCGAGCCGT TCCTGATCGA GTTCGAGCAG CGTGCCTGGG ACAATTCCCT TTTCTACAGC 
CACGAAGGGG TCGAGTTCGT CTACCTGTTG GACGGGGAGT TGGAATTCCA CTACGCCGAC 
GAAGTGATGA AGCTATACGC AGGCGATAGC ATCTACTACG AATCCTCGGA ACCTCATGGT 
TATGTGTCGG TAGGCGAGGT CCGGGCCCGC GCGGTAGCGG TTCTTTATAC TAAAGGATAA
 
Protein sequence
MQEKIKQEIR EMKLGEKVRG LRQEQRLTLQ ALADMTGLSK PLLSQIENDQ VTPPIATLLK 
IAKGLKVGIH YFFEEAGDRQ KFMLTRGEQS PLGSQRRPGK ENIQHGYMYK PLAPGMRQKK 
VEPFLIEFEQ RAWDNSLFYS HEGVEFVYLL DGELEFHYAD EVMKLYAGDS IYYESSEPHG 
YVSVGEVRAR AVAVLYTKG