Gene Gbem_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3390 
Symbol 
ID6780248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3897714 
End bp3898520 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content56% 
IMG OID642769381 
Productpeptidase M48 Ste24p 
Protein accessionYP_002140181 
Protein GI197119754 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000240796 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCC TAAAGTCATT CCTCATCGCT ATCCTTATCA CAGTGCCGCT GGTTTCAGGC 
TGCGCCATCA ACAAGTCTTC AGTGGGCGGA TTCAACCTTG TTTCGGTGGA AGAAGAGAAA
CAGCTGGGTG ACAAGTTTGC AGTCGAGATA GAAAAACAGC ACAAGGTGGT AAACGACCCG
CAACTGCAGA GCTACATCGA AGGCGTTGGG CAAAAGCTGC TGACTGGGGT GCGGAAGGTT
GAATTCCCTT ACACCTTTCA GGTGGTGCAG GATGAGACTA TCAACGCCTT TGCCATCCCC
GGGGGGCACA CCTACGTGAA TACCGGCCTC ATCAAGGCTG CCGGCAGTGA GACCGAATTG
GCCGCAGTCA TCGCGCACGA GATAAACCAC GTGGTGGCAA GGCATTCCAC GAAGCAGATG
ACGCAGCAGT ACGGTTATCA GCTCATCGCC ACCCTGCTGC TGGGCGGAAA TCAGGGCGAG
CTCTCCAAAC TGGCCGCAGA CATGTTCGGT AAAGCCGGCA CCATGTACTA CAGCCGTGAG
ATGGAGAGCC AGGCAGACTA CCTGGGCGTA GAGACCATGT ACAAGGCCGG GTACAACCCG
AACGGGATGG TGACCTTCTT CCAGAAACTG GCTGCCGCAG GGGAGAAAAA TCCAGGCAGC
ATAGCGCGCT TCTTCTCCTC CCACCCGGAG ACGGTGGATA GGATAAAGGC GATCGAGGAG
GAAATCTCGA AGCTGCCGCC TAAAACGTAC CTGCCTGATT CGGCCGCGGC GTTCAGCCAG
GCAAAGGCGA AAGCGCAGAA GTACTAG
 
Protein sequence
MKFLKSFLIA ILITVPLVSG CAINKSSVGG FNLVSVEEEK QLGDKFAVEI EKQHKVVNDP 
QLQSYIEGVG QKLLTGVRKV EFPYTFQVVQ DETINAFAIP GGHTYVNTGL IKAAGSETEL
AAVIAHEINH VVARHSTKQM TQQYGYQLIA TLLLGGNQGE LSKLAADMFG KAGTMYYSRE
MESQADYLGV ETMYKAGYNP NGMVTFFQKL AAAGEKNPGS IARFFSSHPE TVDRIKAIEE
EISKLPPKTY LPDSAAAFSQ AKAKAQKY