Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3387 |
Symbol | |
ID | 6780245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3894104 |
End bp | 3895777 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642769378 |
Product | Radical SAM domain protein |
Protein accession | YP_002140178 |
Protein GI | 197119751 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.384607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCC TGCTTTCCAC GCTGCACGCA AAGTACGTCC ATGCCTCACT GGCCCTTCCC TATCTCGCCT CAGCCTGCGC CGACTTGCCC GGGTTGGAGT TCCGCATCCT GGAACTGACG GTGAACGAGC AGCAGGACCA ACTCCTCGGC AAACTGTTCG CCGAGGCGCC GGACGTCCTG CTCTTCTCCT GCTACATCTG GAATACCGAT CTCACCCTGA AGATTGCCTC CGACCTGAAG CAGCTCCTTC CCGGCACCTT CATCGTCCTT GGCGGCCCGG AGGTCTCATA CGGATCTTTC GAAATGATGG GGCGAAACGC CGCCATCGAC TGCATCGTGC GGGGAGAGGG AGAGGAGACC TGCCGGGAGT TGCTGCAGGC CCTGGCAGGC GGAGTCCCCC TCGACGATAT ACCTGGCATC ACCTACCGGG ACCACGACGA GGTCGTCGCC AATCCGGAGC GCGGAGCGAT AACAAAGCTG GACAGCATTC CCTCCCCCTT TGCCGCAGGC CTGGTGGACC TCGACAAGCC GCTTGTCTAC TACGAGACTT CCCGCGGCTG CCCCTTCTCC TGCGCCTTCT GCATGTCCTC TCTGGAAAAC GGCGTCCGCT CCTTTTCCAT GGAACGGATC GAAGCCGACC TGCGCCTGCT CATGGATAGG GGAGTAAAGA CCGTGAAGCT GGCGGACCGG ACCTTCAACT TCGACACACA AAGGGCCAAC GCCATCTGGC GCTTGATCCT GACGGAGAAC AAGTCGAGCA AGTTCCACTT CGAGATTGCC GCCGAGCTTC TTACCGAGGA GAACCTGGCG CTGCTTGCGG AGGTCCCGGC CGGGATGTTC CGCTTCGAGA TCGGCGTCCA GTCAGGCGGC GAAAAGACGC TCGCCAAGGT GCAGCGGAAG TCGAGCCTGG ACAAGCTGTA TCAAAATGTG AGGGCAGTCA TTGAGAGGAC CAAGGTGACG GTCCACCTGG ATCTTGTCGC GGGTCTTCCC GGGGAATCGC TGGAGGGTTT CCTGGCTTCA CTGCAGGGGC TTTTCGAGCT GGGGGGAAAT CACATCCAAG TCGAACCGCT CAAGGTTCTA AAGGGGACCG CCATGCGCGG CATCGCCCGC AAGGAAGGTT ACGCCTATGC CGAAGCGGCG CCCTACAAGG TGCTGCAGAC CCCTTGGCTC AGCTTCCCGG ACCTCCGCCG CATAGAGACC ATCAGCCGTC TCCTGGACCT CATTTACAAC AGCGGCAGGT TTGCCGCCTC GCTGCGGCAG CTCGGCAACG GCAAGGAACT GGCGCAGGTC TTCGCCGATG CCGCCGACTT CTTCGAAAGC GAAGGTCTCA TGGCCAATGT CTCGCTGCAA CTTTTGTTCG AATCCGTATG GCGTTTTGCC TGCAGCCGGC TTGCGGGAGA AGAGTTGGAG CTGTTCCGTG ACGCCCTTTG CTTCGACCAC TGCATGACCG GCTATCCCGG TGGCCAGTGT CCCAGTTTCT TCACAGCCAA CGTCGAAAAG AGCGAGCAAG GAGCGCCAGC CGGGCTCGCC GCCAAGCCCG CCGAACGAGT CAGGTACTAC CGGCGCAGGT TCGCCAGGGA TTATCGCAGC ATCCCTTGGG GCAAAGCCGC GGTAGAGCTC ACCTTCATCT ATCGCTCAGC CCCCGGAGAA GGATTGAAGG TCGAGATTCT GTAG
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Protein sequence | MKILLSTLHA KYVHASLALP YLASACADLP GLEFRILELT VNEQQDQLLG KLFAEAPDVL LFSCYIWNTD LTLKIASDLK QLLPGTFIVL GGPEVSYGSF EMMGRNAAID CIVRGEGEET CRELLQALAG GVPLDDIPGI TYRDHDEVVA NPERGAITKL DSIPSPFAAG LVDLDKPLVY YETSRGCPFS CAFCMSSLEN GVRSFSMERI EADLRLLMDR GVKTVKLADR TFNFDTQRAN AIWRLILTEN KSSKFHFEIA AELLTEENLA LLAEVPAGMF RFEIGVQSGG EKTLAKVQRK SSLDKLYQNV RAVIERTKVT VHLDLVAGLP GESLEGFLAS LQGLFELGGN HIQVEPLKVL KGTAMRGIAR KEGYAYAEAA PYKVLQTPWL SFPDLRRIET ISRLLDLIYN SGRFAASLRQ LGNGKELAQV FADAADFFES EGLMANVSLQ LLFESVWRFA CSRLAGEELE LFRDALCFDH CMTGYPGGQC PSFFTANVEK SEQGAPAGLA AKPAERVRYY RRRFARDYRS IPWGKAAVEL TFIYRSAPGE GLKVEIL
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