| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3361 |
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| Symbol | |
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| ID | 6780219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 3863541 |
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| End bp | 3864530 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642769352 |
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| Product | hopanoid-associated sugar epimerase |
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| Protein accession | YP_002140152 |
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| Protein GI | 197119725 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR03466] hopanoid-associated sugar epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0322515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAT TCGTCACAGG CGCCACCGGG TTCATCGGCG CGAGCATCGT GCGCGAATTG
TTGAAGGACG GCTGGGAGGT ACGGGTGCTG GCCCGGCCCG GCTCGGACCG CCGCAACCTC
TTCGGGCTCG ACGTGGAGAT CCGGGAAGGG GATCTGAGCG ATCGCGAAGC GCTGGTGCAG
GCGCTCAGCG GCTGTCAGGC GCTGTTCCAC GCCGCCGCCG ACTACCGGCT CTGGACACGC
ACGCCGCAGG CCATGTACGA TGTCAACGTC AAAGGGACCC GGGCCATACT GTCGGCGGCT
CTCGCGGCGG GGATCGAGAA GGTGGTCTAC ACCAGCAGCG TCGGGACCCT GGGCACCCCC
GGCGACGGCA CCCCCGGCGA CGAGGGCACC CCGGTGGATT TTTGCCACAT GGTGGGGGAC
TACAAAAAGA GCAAGTTCCT CGCCGAGCGG GCCGCGGAAT CGTTTCTGGA GAAGGGGTTG
CCGCTCGTGA TCGTGAACCC ATCGACCCCG GTGGGGCCGA TGGATGTGAA GCCTACGCCT
ACGGGAAAGA TCATAGTCGA CTTCCTGAAC GGCCGGATGC CCGCCTACCT GGACACCGGG
CTGAACCTGA TAGACGTAGA GGCGTGCGCC CGGGGTCATA TCCTGGCGGC GCAGAAGGGG
CGAGTCGGGG AAAAGTACAT CCTTGGCAAC CGCAACCTGA CCCTGGCCGA GATATTCGAG
ATTCTCTCCG GCATCACCGG TCTCAAGGCG CCGCGGGTGA AGCTCCCCTA CTATCCGATA
CTCATGGCCG CCTATGCGAA CCATGCACTG TCGGCCGTGA CCGGGAAAGA GCCGCTGATA
CCGCTTGCCG GAGTGCAGAT GGCAGCGAAG TTCATGTATT TCGATTCGGG GAAGGCGGTG
AGCGAGTTGG GGTTGCCGCT TTGTCCCGTG GAAGGCGCGC TGGAGCGAGC CGTAGAATGG
TTCCGCAGCA ACGGCTACGT AAACCGGTGA
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| Protein sequence | MKAFVTGATG FIGASIVREL LKDGWEVRVL ARPGSDRRNL FGLDVEIREG DLSDREALVQ
ALSGCQALFH AAADYRLWTR TPQAMYDVNV KGTRAILSAA LAAGIEKVVY TSSVGTLGTP
GDGTPGDEGT PVDFCHMVGD YKKSKFLAER AAESFLEKGL PLVIVNPSTP VGPMDVKPTP
TGKIIVDFLN GRMPAYLDTG LNLIDVEACA RGHILAAQKG RVGEKYILGN RNLTLAEIFE
ILSGITGLKA PRVKLPYYPI LMAAYANHAL SAVTGKEPLI PLAGVQMAAK FMYFDSGKAV
SELGLPLCPV EGALERAVEW FRSNGYVNR
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