Gene Gbem_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3343 
Symbol 
ID6780201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3840350 
End bp3841507 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content67% 
IMG OID642769334 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_002140134 
Protein GI197119707 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAC AACTAAGCCT GTTGCAGGAA TTCTCGATTC CTTTGGTGGC CGGCGTCATC 
CTTGCCCTCG CCTGGGCCAA CCTGGCGCCG GAGCAGTACC ACCATCTCCT GCACGACCCG
GTCCTCGCCG GTCTTTCCCT CCACTTCATC ACCAACGACC TGTTCATGAC CTTCTTCTTC
GGCATGGCCG CGGTCGAGAT TACCCAGAGC TGCCTTCCCG GCGGCGACCT GCATCCGCTG
AAACGCGCGG TGAACCCGCT TCTGGCGACG GCGGGAGGGG TGCTCGGCCC GGTCGCCGTC
TACCTGCTTC TGAACGGCTG GTTCGGCGCC CCCGAGCTTG CCCGTGGGTG GGGCATTCCC
ACCGCCACCG ACATCGCGCT TGCCTGGCTT GCCGCCCGCT TCATCTTCGG CAAGGGGCAC
CCCGCCATAT CCTTTCTGTT GCTTCTGGCC ATCGCCGACG ACGCGGTGGG GCTTGCCATC
ATCGCCGTTT TCTACGGGGA CCCGAACACT CCAGCCGCAC CGGCCTGGCT CTTGCTCACC
CTGGCGGGGA TGGCCGCCTG CTACTGGTTC CGTTCCCGGC GGGTGACCAA CTACTGGCCC
TACCTCGTCG CAGGCGGGGT GCTGAGCTGG TCCGGCCTGT TCCTCGCCCA TCTGCACCCG
GCCCTGGCGC TGGTCTTCGT CATCCCTTTC CTGCCGCATC CCTCCAGTGA GACGGCGCAC
CTCTTCGAGC TCGACCCGGA GGACCACACC CCGCTCTCCC GCTTCGAGCA CGACTGGAAG
CTGTTCGTCG ACCTGGGGCT GTTCGTCTTC GGGCTGGTGA ACGCCGGCGT TTCCTTCGGC
TCGGTCGGTC CCGCCACCTG GCTCGTCCTC GCGGCGTTGT TAGGCGGCAA GGCGGTGGGG
ATCGTGTCGT TCGCGCTGGC TGGGCGCGGC ATCGGCTTTC CGCTGCCGGT CGGCATGGGG
CTGCGCGAAC TCGTCGCCAC CGGCCTAATG GCAGGGATAG GGTTTACCGT TGCCCTCTTC
GTGGCAGGCG AGGCGTTTTC CGACCCGAAG CTGAGCGGCG CCGCCAAGAT GGGGGCGATG
CTGAGCCTCT TCGCATTTGT GCCGGCTGCC GCGGTCGAGA GGATAGGCCG CCGGTTCGGC
AAGGCCGGCC GGCGCTAA
 
Protein sequence
MKKQLSLLQE FSIPLVAGVI LALAWANLAP EQYHHLLHDP VLAGLSLHFI TNDLFMTFFF 
GMAAVEITQS CLPGGDLHPL KRAVNPLLAT AGGVLGPVAV YLLLNGWFGA PELARGWGIP
TATDIALAWL AARFIFGKGH PAISFLLLLA IADDAVGLAI IAVFYGDPNT PAAPAWLLLT
LAGMAACYWF RSRRVTNYWP YLVAGGVLSW SGLFLAHLHP ALALVFVIPF LPHPSSETAH
LFELDPEDHT PLSRFEHDWK LFVDLGLFVF GLVNAGVSFG SVGPATWLVL AALLGGKAVG
IVSFALAGRG IGFPLPVGMG LRELVATGLM AGIGFTVALF VAGEAFSDPK LSGAAKMGAM
LSLFAFVPAA AVERIGRRFG KAGRR