Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3333 |
Symbol | sdhA |
ID | 6780191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3828038 |
End bp | 3829951 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642769324 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_002140124 |
Protein GI | 197119697 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000650978 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATACTCG ACGGAAAATG TCCGAAAGGA CCGATTCAGA CCTCGTGGGA CCGGCACCGC TTCGACCTGA AGCTGGTCAA CCCCGCAAAC AAGCGTAAGT ACAAGATCCT CGTTGTCGGC ACCGGCCTGG CCGGCGGCGC AGCCGCAGCT TCCTTGGGCG AGCTCGGCTA CAACGTCGAA GCCTTCTGCT ACCAGGACAG CGCACGTCGC GCCCACTCCA TCGCAGCGCA GGGCGGCATC AACGCCGCGA AAAACTACCC GAACGACGGC GACAGCATCT ACCGCCTGTT CTACGACACC ATCAAAGGCG GCGACTTCCG CGCCCGCGAG GCGGACGTGT GGCGTCTGGC CCAGGTGTCC AACAACATCA TCGACCAGTG CGTGGCCCAG GGTGTCCCCT TCGCCCGCGA CTACGCCGGC TACCTGGATA ACCGCTCCTT CGGCGGCGCG CAGGTTTCCC GTACCTTCTA CGCCCGTGGC CAAACGGGCC AGCAGCTCCT TCTGGGCGCC TACTCGGCAC TCTCCCGCCA GGTGAAGGCT GGGACCGTGA AGCTCTTCGC CCGCACCGAG ATGCTGGATC TTGTCGTCGT CGACGGCGAG GCCAAAGGGA TCACCATACG CGACCTGATC ACCGGCGAGA TCCGCACCCA CGTGGGTGAC GCGGTCGTCC TCGCCACCGG CGGCTACGTG AACGTGTTCT ACCTCTCCAC CAACGCGATG GGGTGCTCCG TCACCGCCAA CTGGCGCGCT CACAAAAAAG GCGCCTTCTT CGCCAACCCC TGCTACACGC AGATCCACCC GACCTGCATC CCGCAGTCCG GCGACCACCA GTCCAAGCTG ACCCTCATGT CCGAGTCGCT CAGGAACGAC GGCCGCTGCT GGGCTCCCAA GAAGAAGGGG GACAACCGTC ACCCCAACGA GATCCCGGAA GACGAGCGCG ACTACTACCT GGAGAGGAAG TATCCCTCCT TCGGCAACCT CGCTCCCCGC GACATCGCCT CGCGCGCTGC GAAAGAGCAG TGCGACGACG GGCGCGGCGT CGGCCCTGGC GGCCGCGGCG TGAATCTGGA CTTCTCCGCT GCGATCCAGC GCGTCGGTGA GGACACCATC CGCGAGCGCT ACGGCAACCT CTTCGAGATG TACGAGAAGA TCACCGACGA GAACGCGTAC AAACAGCCGA TGCGCATGTA CCCGGCACCG CACTACTCCA TGGGCGGCCT CTGGGTCGAC TACAACTGCG AGAGCAACGT CCCGGGCCTG TTCGTTTTGG GCGAGGCGAA CTTCTCGGTC CACGGCGCTA ACCGCCTGGG CGCCTCGGCA CTGATGCAGG GCCTGGCCGA CGGCTACTTC GTCATCCCCT ACACCATCGC CAACTACCTC GCCAAGACCA AGCCGGGCGC CGTCAAGGCG GATCACCCGG AGTGCAAGAA GTCGATCGAG GACGTGAAGA GCTACAACAA CCGCCTGCTC AACATCAACG GCAAGAAGAC CGTTTCCGAG TTCCACCGCG AACTGGGCAA GATCATGTGG GAAAACGTCG GCATGGCGAG AAGCGAAGAG ACCCTCAAGG ACGCCATCAA GAAGATCCCG GTCCTGCGCG AGGAGTTCTG GAAGAACGTC AAGGTCACCG GCAAGGGCGA GGAACTGAAC CAGCAGCTGG AGAACGCCGG CCGCGTGGCG GACTTCCTCG AGTTCGGCGA GCTGATGGCA AAGGACGCTC TGCACAGGAA CGAGTCCTGC GGTGGCCACT TCCGCGTCGA GCACCAGATG CCGGACGGCG AGGCGAAGCG CGACGACGAG AACTACTGCT ACGTCGGGGC CTGGGAGTTC AAAGGTGTCG ACAAGGAGCC CGAACTGCAC AAGGAGCCGT TGGCGTTCGA TAACGTACAT CTGGCGGTAA GGAGTTATAA ATAA
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Protein sequence | MILDGKCPKG PIQTSWDRHR FDLKLVNPAN KRKYKILVVG TGLAGGAAAA SLGELGYNVE AFCYQDSARR AHSIAAQGGI NAAKNYPNDG DSIYRLFYDT IKGGDFRARE ADVWRLAQVS NNIIDQCVAQ GVPFARDYAG YLDNRSFGGA QVSRTFYARG QTGQQLLLGA YSALSRQVKA GTVKLFARTE MLDLVVVDGE AKGITIRDLI TGEIRTHVGD AVVLATGGYV NVFYLSTNAM GCSVTANWRA HKKGAFFANP CYTQIHPTCI PQSGDHQSKL TLMSESLRND GRCWAPKKKG DNRHPNEIPE DERDYYLERK YPSFGNLAPR DIASRAAKEQ CDDGRGVGPG GRGVNLDFSA AIQRVGEDTI RERYGNLFEM YEKITDENAY KQPMRMYPAP HYSMGGLWVD YNCESNVPGL FVLGEANFSV HGANRLGASA LMQGLADGYF VIPYTIANYL AKTKPGAVKA DHPECKKSIE DVKSYNNRLL NINGKKTVSE FHRELGKIMW ENVGMARSEE TLKDAIKKIP VLREEFWKNV KVTGKGEELN QQLENAGRVA DFLEFGELMA KDALHRNESC GGHFRVEHQM PDGEAKRDDE NYCYVGAWEF KGVDKEPELH KEPLAFDNVH LAVRSYK
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