Gene Gbem_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3333 
SymbolsdhA 
ID6780191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3828038 
End bp3829951 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content63% 
IMG OID642769324 
Productsuccinate dehydrogenase flavoprotein subunit 
Protein accessionYP_002140124 
Protein GI197119697 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000650978 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATACTCG ACGGAAAATG TCCGAAAGGA CCGATTCAGA CCTCGTGGGA CCGGCACCGC 
TTCGACCTGA AGCTGGTCAA CCCCGCAAAC AAGCGTAAGT ACAAGATCCT CGTTGTCGGC
ACCGGCCTGG CCGGCGGCGC AGCCGCAGCT TCCTTGGGCG AGCTCGGCTA CAACGTCGAA
GCCTTCTGCT ACCAGGACAG CGCACGTCGC GCCCACTCCA TCGCAGCGCA GGGCGGCATC
AACGCCGCGA AAAACTACCC GAACGACGGC GACAGCATCT ACCGCCTGTT CTACGACACC
ATCAAAGGCG GCGACTTCCG CGCCCGCGAG GCGGACGTGT GGCGTCTGGC CCAGGTGTCC
AACAACATCA TCGACCAGTG CGTGGCCCAG GGTGTCCCCT TCGCCCGCGA CTACGCCGGC
TACCTGGATA ACCGCTCCTT CGGCGGCGCG CAGGTTTCCC GTACCTTCTA CGCCCGTGGC
CAAACGGGCC AGCAGCTCCT TCTGGGCGCC TACTCGGCAC TCTCCCGCCA GGTGAAGGCT
GGGACCGTGA AGCTCTTCGC CCGCACCGAG ATGCTGGATC TTGTCGTCGT CGACGGCGAG
GCCAAAGGGA TCACCATACG CGACCTGATC ACCGGCGAGA TCCGCACCCA CGTGGGTGAC
GCGGTCGTCC TCGCCACCGG CGGCTACGTG AACGTGTTCT ACCTCTCCAC CAACGCGATG
GGGTGCTCCG TCACCGCCAA CTGGCGCGCT CACAAAAAAG GCGCCTTCTT CGCCAACCCC
TGCTACACGC AGATCCACCC GACCTGCATC CCGCAGTCCG GCGACCACCA GTCCAAGCTG
ACCCTCATGT CCGAGTCGCT CAGGAACGAC GGCCGCTGCT GGGCTCCCAA GAAGAAGGGG
GACAACCGTC ACCCCAACGA GATCCCGGAA GACGAGCGCG ACTACTACCT GGAGAGGAAG
TATCCCTCCT TCGGCAACCT CGCTCCCCGC GACATCGCCT CGCGCGCTGC GAAAGAGCAG
TGCGACGACG GGCGCGGCGT CGGCCCTGGC GGCCGCGGCG TGAATCTGGA CTTCTCCGCT
GCGATCCAGC GCGTCGGTGA GGACACCATC CGCGAGCGCT ACGGCAACCT CTTCGAGATG
TACGAGAAGA TCACCGACGA GAACGCGTAC AAACAGCCGA TGCGCATGTA CCCGGCACCG
CACTACTCCA TGGGCGGCCT CTGGGTCGAC TACAACTGCG AGAGCAACGT CCCGGGCCTG
TTCGTTTTGG GCGAGGCGAA CTTCTCGGTC CACGGCGCTA ACCGCCTGGG CGCCTCGGCA
CTGATGCAGG GCCTGGCCGA CGGCTACTTC GTCATCCCCT ACACCATCGC CAACTACCTC
GCCAAGACCA AGCCGGGCGC CGTCAAGGCG GATCACCCGG AGTGCAAGAA GTCGATCGAG
GACGTGAAGA GCTACAACAA CCGCCTGCTC AACATCAACG GCAAGAAGAC CGTTTCCGAG
TTCCACCGCG AACTGGGCAA GATCATGTGG GAAAACGTCG GCATGGCGAG AAGCGAAGAG
ACCCTCAAGG ACGCCATCAA GAAGATCCCG GTCCTGCGCG AGGAGTTCTG GAAGAACGTC
AAGGTCACCG GCAAGGGCGA GGAACTGAAC CAGCAGCTGG AGAACGCCGG CCGCGTGGCG
GACTTCCTCG AGTTCGGCGA GCTGATGGCA AAGGACGCTC TGCACAGGAA CGAGTCCTGC
GGTGGCCACT TCCGCGTCGA GCACCAGATG CCGGACGGCG AGGCGAAGCG CGACGACGAG
AACTACTGCT ACGTCGGGGC CTGGGAGTTC AAAGGTGTCG ACAAGGAGCC CGAACTGCAC
AAGGAGCCGT TGGCGTTCGA TAACGTACAT CTGGCGGTAA GGAGTTATAA ATAA
 
Protein sequence
MILDGKCPKG PIQTSWDRHR FDLKLVNPAN KRKYKILVVG TGLAGGAAAA SLGELGYNVE 
AFCYQDSARR AHSIAAQGGI NAAKNYPNDG DSIYRLFYDT IKGGDFRARE ADVWRLAQVS
NNIIDQCVAQ GVPFARDYAG YLDNRSFGGA QVSRTFYARG QTGQQLLLGA YSALSRQVKA
GTVKLFARTE MLDLVVVDGE AKGITIRDLI TGEIRTHVGD AVVLATGGYV NVFYLSTNAM
GCSVTANWRA HKKGAFFANP CYTQIHPTCI PQSGDHQSKL TLMSESLRND GRCWAPKKKG
DNRHPNEIPE DERDYYLERK YPSFGNLAPR DIASRAAKEQ CDDGRGVGPG GRGVNLDFSA
AIQRVGEDTI RERYGNLFEM YEKITDENAY KQPMRMYPAP HYSMGGLWVD YNCESNVPGL
FVLGEANFSV HGANRLGASA LMQGLADGYF VIPYTIANYL AKTKPGAVKA DHPECKKSIE
DVKSYNNRLL NINGKKTVSE FHRELGKIMW ENVGMARSEE TLKDAIKKIP VLREEFWKNV
KVTGKGEELN QQLENAGRVA DFLEFGELMA KDALHRNESC GGHFRVEHQM PDGEAKRDDE
NYCYVGAWEF KGVDKEPELH KEPLAFDNVH LAVRSYK