| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3328 |
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| Symbol | |
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| ID | 6780186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3824439 |
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| End bp | 3825332 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642769320 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002140120 |
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| Protein GI | 197119693 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGGGA TGTCTTCCGA CAAGTTGCTG AACAGCCTTT TCGACGGTCT TTACTGCGTC
GATCTGGACC GGCGCATCTC CTTTTGGAAC AGTGCCGCTC AGAGGATAAC AGGGTACAGC
GCCGAGGAAG TGCTCGGCTC CAACTGCCAC GACTCCATCC TGCGCCGTGT CGAGGTCGAC
GGCTACGAAT GCGAGGTGAA GTGCCCGCTG GCGGCGACCA TTGCAGACGG CAAGGTACGG
GAGGCTAACG TGCTGGTGCA CCACAAGCAC GGCTACCGAC TCCCGGTGCA GGTGCGCACC
TCTCCGGTGA GAAACGAAGA GGGCGCCATA GTCGGCGCCG TCGAAATATT CACCGACAAC
TCCAATTCGG TGCAGATCCT CGCGGCGCTG GAGCAACTGA AGCAGGACGT GCTGGTCGAT
CCGCTCACCG GGGTGGGGAA CCGGAGGCTC GCGGACATGT CGCTGGAGTC GAGGCTGCAT
GACTGGCAGA CGCACCGCAG GCCCTTCGGC GTGCTCTTCA TGGATGTCGA CCATTTTAAA
AGCGTCAACG ACCGCTACGG GCATAAGACC GGCGACGAGG TGTTGCGCAT GTTAGGCAAG
ACCATATCCA ACACGTTCAG GAAAGTGGAT ACCGTGGCGC GCTGGGGTGG GGAGGAATTC
GTGGCCATTC TTCCCGCCAT GAGGCTCCCT GCGCTCGCCT CCATAGCTGA ACGAATCAGA
AGTGCGGTCG CCGGCTCCTT CCTGATGGAG GACGGCCAAA GGGTCGGCGT CACCCTCTCC
ATCGGCGGGA CCATAGCCGA GACGGGGGAT AACGCCGAAA GCATCATCAG CAGGGCGGAC
GCGCAGATGT ATCGGAGCAA GGCTGGCGGC CGGAACCTGG TCACCCTGCG CTAG
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| Protein sequence | MLGMSSDKLL NSLFDGLYCV DLDRRISFWN SAAQRITGYS AEEVLGSNCH DSILRRVEVD
GYECEVKCPL AATIADGKVR EANVLVHHKH GYRLPVQVRT SPVRNEEGAI VGAVEIFTDN
SNSVQILAAL EQLKQDVLVD PLTGVGNRRL ADMSLESRLH DWQTHRRPFG VLFMDVDHFK
SVNDRYGHKT GDEVLRMLGK TISNTFRKVD TVARWGGEEF VAILPAMRLP ALASIAERIR
SAVAGSFLME DGQRVGVTLS IGGTIAETGD NAESIISRAD AQMYRSKAGG RNLVTLR
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